Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR196W
Length:
576
Number of sequences:
5887
Description:
YLR196W PWP1 SGDID:S000004186, Chr XII from 543968-545698, Genome Release 64-1-1, Verified ORF, "Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451P42527    1146   MHCKA_DICDI Myosin heavy chain kinase A OS=Di...763     34.7     30     51GO:0005938; C:cell cortex; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.::GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016887; F:ATPase activity; IDA:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0051764; P:actin crosslink formation; IDA:dictyBase.::GO:0051017; P:actin filament bundle assembly; IDA:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IDA:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.::GO:0051260; P:protein homooligomerization; IDA:dictyBase.
452Q96KV7    1748   WDR90_HUMAN WD repeat-containing protein 90 O...1033     34.7     27     45
453Q66JG1    501   DDB2_XENTR DNA damage-binding protein 2 OS=Xe...663     34.3     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
454C5DY07    444   LIS1_ZYGRC Nuclear distribution protein PAC1 ...623     34.3     37     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
455P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...2093.1     34.3     23     41GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
456Q4PCB8    364   SEC13_USTMA Protein transport protein SEC13 O...843.1     34.3     30     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
457Q0VC24    423   WDR12_BOVIN Ribosome biogenesis protein WDR12...2113.2     34.3     25     43GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
458Q66J51    325   EIF3I_XENLA Eukaryotic translation initiation...893.1     34.3     31     49GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
459O75529    589   TAF5L_HUMAN TAF5-like RNA polymerase II p300/...1163.2     34.3     28     47GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
460Q5ZMV9    705   WDR24_CHICK WD repeat-containing protein 24 O...1553.2     34.3     23     39
461Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...2218.6     33.1     24     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
462Q4P8R5    814   MDV1_USTMA Mitochondrial division protein 1 O...793.3     34.3     28     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
463O24076    325   GBLP_MEDSA Guanine nucleotide-binding protein...1073.3     33.9     27     47
464Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...2123.3     34.3     24     44GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
465Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...653.5     34.3     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
466Q9CX97    388   WDR55_MOUSE WD repeat-containing protein 55 O...1163.5     33.9     22     44GO:0005737; C:cytoplasm; IMP:UniProtKB.::GO:0005730; C:nucleolus; IMP:UniProtKB.
GO:0006364; P:rRNA processing; IMP:UniProtKB.
467Q9BZK7    514   TBL1R_HUMAN F-box-like/WD repeat-containing p...653.5     34.3     37     55GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
468A9V790    410   LIS1_MONBE Lissencephaly-1 homolog OS=Monosig...323.5     34.3     53     72GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
469Q7SZM9    519   TB1RA_XENLA F-box-like/WD repeat-containing p...653.6     34.3     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
470Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...2573.6     34.3     21     36GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
471Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...1603.7     33.9     21     46GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
472Q54ED4    482   GRWD1_DICDI Glutamate-rich WD repeat-containi...893.7     33.9     28     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
473Q54ZP5    1172   WDR48_DICDI WD repeat-containing protein 48 h...903.8     34.3     28     46
474Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...2273.9     34.3     21     39
475Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...1364     33.9     28     43GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
476Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...1804     33.9     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
477Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...804     34.3     25     55GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
478Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...824.1     33.9     29     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
479Q7Z4S6    1674   KI21A_HUMAN Kinesin-like protein KIF21A OS=Ho...1904.1     34.3     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
480Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...1804.1     33.9     24     44
481Q5AEF2    298   SEC13_CANAL Protein transport protein SEC13 O...1484.2     33.5     26     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 563 451 - 480
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::