Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR196W
Length:
576
Number of sequences:
5887
Description:
YLR196W PWP1 SGDID:S000004186, Chr XII from 543968-545698, Genome Release 64-1-1, Verified ORF, "Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...532.1     35     36     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
422A2QP30    443   LIS1_ASPNC Nuclear distribution protein nudF ...462.2     34.7     43     54GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
423Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...652.2     35     37     55GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
424P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...1092.2     34.7     24     46
425Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...1574.4     33.9     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
426Q32KS2    702   DNAI1_BOVIN Dynein intermediate chain 1, axon...1332.2     35     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
427P53197    566   CDH1_YEAST APC/C activator protein CDH1 OS=Sa...1562.2     35     21     45GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0010997; F:anaphase-promoting complex binding; IDA:SGD.::GO:0030332; F:cyclin binding; IDA:SGD.::GO:0097027; F:ubiquitin-protein ligase activator activity; IDA:SGD.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010697; P:negative regulation of spindle pole body separation; IMP:SGD.::GO:2000600; P:positive regulation of cyclin catabolic process; IDA:SGD.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.
428Q3TZ89    1158   SC31B_MOUSE Protein transport protein Sec31B ...1532.2     35     22     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
429Q9P7C0    524   YKU5_SCHPO Uncharacterized WD repeat-containi...1462.2     34.7     23     46GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
430Q5VTH9    848   WDR78_HUMAN WD repeat-containing protein 78 O...1252.3     35     26     42
431A2QCU8    670   SCONB_ASPNC Probable E3 ubiquitin ligase comp...1088.1     33.1     23     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
432Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...1602.4     34.7     24     43GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
433B6QC06    452   LIS12_PENMQ Nuclear distribution protein nudF...625.4     33.5     35     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
434P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...1142.4     34.7     28     44
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
435Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...852.4     34.7     27     49GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
436A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...1162.5     34.7     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
437Q9GZL7    423   WDR12_HUMAN Ribosome biogenesis protein WDR12...1234.7     33.5     24     46GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.
438D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...752.5     34.7     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
439Q12702    463   2ABA_SCHPO Protein phosphatase PP2A regulator...2282.6     34.7     20     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0000159; C:protein phosphatase type 2A complex; IC:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0008601; F:protein phosphatase type 2A regulator activity; ISS:PomBase.
GO:0034260; P:negative regulation of GTPase activity; IGI:PomBase.::GO:0031030; P:negative regulation of septation initiation signaling cascade; IGI:PomBase.::GO:0071775; P:regulation of cell cycle cytokinesis; IMP:PomBase.::GO:0008360; P:regulation of cell shape; IMP:PomBase.::GO:2000765; P:regulation of cytoplasmic translation; ISS:PomBase.::GO:2000769; P:regulation of establishment or maintenance of cell polarity regulating cell shape; IMP:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IMP:PomBase.::GO:0034047; P:regulation of protein phosphatase type 2A activity; IC:PomBase.::GO:0007165; P:signal transduction; IEA:InterPro.
440A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1762.6     34.7     20     45
441B1ANS9    1081   WDR64_HUMAN WD repeat-containing protein 64 O...842.7     34.7     26     48
442Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...1023.3     34.3     29     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
443Q4P9P9    453   LIS1_USTMA Nuclear distribution protein PAC1 ...1592.7     34.7     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
444Q8C4J7    801   TBL3_MOUSE Transducin beta-like protein 3 OS=...2462.7     34.7     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
445A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...1302.8     34.3     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
446Q8CFJ9    790   WDR24_MOUSE WD repeat-containing protein 24 O...1132.8     34.7     23     42
447Q7RY30    453   LIS11_NEUCR Nuclear distribution protein pac1...752.8     34.3     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
448P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...1142.9     34.3     25     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
449Q12834    499   CDC20_HUMAN Cell division cycle protein 20 ho...1362.9     34.3     27     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
450Q8N0X2    631   SPG16_HUMAN Sperm-associated antigen 16 prote...1072.9     34.7     29     46GO:0035085; C:cilium axoneme; ISS:UniProtKB.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
451P42527    1146   MHCKA_DICDI Myosin heavy chain kinase A OS=Di...763     34.7     30     51GO:0005938; C:cell cortex; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.::GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016887; F:ATPase activity; IDA:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0051764; P:actin crosslink formation; IDA:dictyBase.::GO:0051017; P:actin filament bundle assembly; IDA:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IDA:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.::GO:0051260; P:protein homooligomerization; IDA:dictyBase.
records
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