Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR196W
Length:
576
Number of sequences:
5887
Description:
YLR196W PWP1 SGDID:S000004186, Chr XII from 543968-545698, Genome Release 64-1-1, Verified ORF, "Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331B4LUA5    322   EIF3I_DROVI Eukaryotic translation initiation...1580.85     35.8     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
332Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...720.86     36.2     29     49GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
333P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...1170.86     35.8     28     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
334Q6BZX5    298   SEC13_YARLI Protein transport protein SEC13 O...1430.87     35.8     24     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
335Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...2390.88     35.8     25     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
336Q803D2    410   LIS1B_DANRE Lissencephaly-1 homolog B OS=Dani...770.89     35.8     31     55GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0045176; P:apical protein localization; IMP:ZFIN.::GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0040023; P:establishment of nucleus localization; IMP:ZFIN.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045494; P:photoreceptor cell maintenance; IMP:ZFIN.::GO:0006810; P:transport; IEA:UniProtKB-KW.
337Q6BKH9    584   YD156_DEBHA WD repeat-containing protein DEHA...770.9     36.2     25     51
338Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...1750.9     36.2     25     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
339C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...2090.95     35.8     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
340Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...1200.96     35.8     27     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
341Q16959    702   DYI2_ANTCR Dynein intermediate chain 2, cilia...1350.97     36.2     23     41GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
342O60136    586   YNS5_SCHPO Uncharacterized WD repeat-containi...740.97     36.2     31     53GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
343B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...2001     35.8     25     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
344Q04225    511   RRB1_YEAST Ribosome assembly protein RRB1 OS=...861     35.8     30     43GO:0005730; C:nucleolus; IDA:SGD.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
345Q7S4F7    421   JIP5_NEUCR WD repeat-containing protein jip-5...1941     35.8     26     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
346Q96JK2    942   DCAF5_HUMAN DDB1- and CUL4-associated factor ...1051     36.2     27     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
347O13615    473   PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=...1924.7     33.9     22     46GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
348Q9UUG8    598   TUP12_SCHPO Transcriptional repressor tup12 O...1301     35.8     26     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IDA:PomBase.
GO:0043156; P:chromatin remodeling in response to cation stress; IMP:PomBase.::GO:0006342; P:chromatin silencing; IMP:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
349P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1331.1     35.8     25     47GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
350D3BUN1    417   LIS1_POLPA Lissencephaly-1 homolog OS=Polysph...521.1     35.8     35     62GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
351Q0D0X6    446   LIS1_ASPTN Nuclear distribution protein nudF ...481.1     35.8     42     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
352P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...1421.1     35.4     27     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
353Q8HXX0    410   LIS1_MACFA Platelet-activating factor acetylh...801.1     35.8     33     51GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
354D5GBI7    452   LIS1_TUBMM Nuclear distribution protein PAC1 ...511.1     35.8     37     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
355Q9H6Y2    383   WDR55_HUMAN WD repeat-containing protein 55 O...1161.1     35.8     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
356Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...1921.1     35.8     22     42GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
357Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...1581.1     35.4     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
358B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...1581.1     35.4     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
359A1CF18    435   LIS12_ASPCL Nuclear distribution protein nudF...612.5     34.7     34     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
360P53024    289   SEC13_PICPG Protein transport protein SEC13 O...1881.1     35.4     21     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
361Q80T85    946   DCAF5_MOUSE DDB1- and CUL4-associated factor ...1051.1     35.8     27     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005739; C:mitochondrion; IDA:MGI.
records
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