Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR196W
Length:
576
Number of sequences:
5887
Description:
YLR196W PWP1 SGDID:S000004186, Chr XII from 543968-545698, Genome Release 64-1-1, Verified ORF, "Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...7410     32.7     35     51GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
182B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...1530.091     39.3     25     46
183Q6FWT9    467   LIS1_CANGA Nuclear distribution protein PAC1 ...300.094     39.3     53     73GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
184Q6QEF8    472   CORO6_HUMAN Coronin-6 OS=Homo sapiens (Human)...2430.095     39.3     24     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
185P52287    340   GBB3_RAT Guanine nucleotide-binding protein G...1680.097     38.9     26     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
186C3XVT5    406   LIS1_BRAFL Lissencephaly-1 homolog OS=Branchi...770.097     38.9     31     57GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
187A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...1288     33.1     26     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
188A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...992     35     24     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
189Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...2020.85     36.2     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
190A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...1000.1     39.3     29     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
191Q7QJ33    428   WDR12_ANOGA Ribosome biogenesis protein WDR12...2080.1     38.9     25     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
192Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...1080.11     39.3     28     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
193Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...1350.11     38.9     25     50GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
194Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...1000.11     39.3     29     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
195A5DAQ7    573   YD156_PICGU WD repeat-containing protein PGUG...1110.23     38.1     25     50
196A1DHK2    1263   SEC31_NEOFI Protein transport protein sec31 O...1520.12     39.3     24     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
197Q9XF57    317   PEX7_ARATH Peroxisome biogenesis protein 7 OS...850.12     38.5     31     48GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
198A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...1000.12     38.9     29     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
199A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1290.12     38.5     26     45
200Q6S003    1873   KIF8_DICDI Kinesin-related protein 8 OS=Dicty...1330.66     37     24     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
201Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...1920.57     36.6     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
202A1C6X5    1276   SEC31_ASPCL Protein transport protein sec31 O...1520.14     38.9     24     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
203O13923    601   CORO_SCHPO Coronin-like protein crn1 OS=Schiz...1320.14     38.9     31     46GO:0030479; C:actin cortical patch; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.::GO:0005885; C:Arp2/3 protein complex; ISS:RefGenome.::GO:0051286; C:cell tip; IDA:PomBase.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0051666; P:actin cortical patch localization; ISS:RefGenome.::GO:0051017; P:actin filament bundle assembly; TAS:PomBase.::GO:0030041; P:actin filament polymerization; NAS:PomBase.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; ISS:RefGenome.
204P57737    925   CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...1976.3     33.5     25     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
205A5DXE2    304   SEC13_LODEL Protein transport protein SEC13 O...1510.14     38.1     26     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
206Q9WUM3    484   COR1B_MOUSE Coronin-1B OS=Mus musculus (Mouse...1255.1     33.5     24     39GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
207Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...1750.15     38.5     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
208P79147    340   GBB3_CANFA Guanine nucleotide-binding protein...1450.15     38.5     28     42GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
209Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...1245.7     33.5     31     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
210Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...1950.15     38.9     24     41GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
211B6Q4Z5    660   SCONB_PENMQ Probable E3 ubiquitin ligase comp...3340.24     38.1     20     38
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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