Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR175W
Length:
483
Number of sequences:
5887
Description:
YLR175W CBF5 SGDID:S000004165, Chr XII from 506134-507585, Genome Release 64-1-1, Verified ORF, "Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), acts on both large and small rRNAs and on snRNA U2; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q9SMH4    410   RAA2_CHLRE Trans-splicing factor Raa2, chloro...730.001     45.1     32     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
512Q8CXU1    309   TRUB_LEPIN tRNA pseudouridine synthase B OS=(...2790.001     44.3     24     39
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
513A7H2Q5    272   TRUB_CAMJD tRNA pseudouridine synthase B OS=2...1980.006     42     23     41
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
514B2S4C6    366   TRUB_TREPS tRNA pseudouridine synthase B OS=T...2180.012     41.6     22     38
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
515O83859    366   TRUB_TREPA tRNA pseudouridine synthase B OS=T...2180.012     41.6     22     38
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
516Q8IID4    5251   DYHC2_PLAF7 Dynein heavy chain-like protein P...814.6     33.9     28     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; ISS:UniProtKB.
GO:0007018; P:microtubule-based movement; ISS:UniProtKB.
517A7M9B2    1750   YCF1_CUSRE Putative membrane protein ycf1 OS=...1000.046     40     24     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0042170; C:plastid membrane; IEA:UniProtKB-SubCell.
518O59721    407   PUS4_SCHPO Probable tRNA pseudouridine syntha...930.11     38.5     27     44GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0009982; F:pseudouridine synthase activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0031119; P:tRNA pseudouridine synthesis; IC:PomBase.
519Q4A0V8    2316   UAFA_STAS1 Uro-adherence factor A OS=DSM 2022...1161.1     35.8     25     44GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
520Q8SX83    5560   SPEN_DROME Protein split ends OS=Drosophila m...661.1     35.8     24     65GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007411; P:axon guidance; IMP:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0048106; P:establishment of thoracic bristle planar orientation; IMP:FlyBase.::GO:0007403; P:glial cell fate determination; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0035321; P:maintenance of imaginal disc-derived wing hair orientation; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:UniProtKB.::GO:0007422; P:peripheral nervous system development; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
521Q5SFM8    1060   RBM27_MOUSE RNA-binding protein 27 OS=Mus mus...640.93     35.8     33     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:InterPro.
522P45386    1849   IGA4_HAEIF Immunoglobulin A1 protease autotra...1081     35.8     26     43GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
523Q9P2N5    1060   RBM27_HUMAN RNA-binding protein 27 OS=Homo sa...641.4     35.4     33     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:InterPro.
524Q1DQC1    1485   PAN1_COCIM Actin cytoskeleton-regulatory comp...828.9     32.7     26     51GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
525Q96L96    1907   ALPK3_HUMAN Alpha-protein kinase 3 OS=Homo sa...1251.5     35.4     21     50GO:0005634; C:nucleus; ISS:HGNC.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO:0007507; P:heart development; ISS:HGNC.
526B5FA79    893   IF2_VIBFM Translation initiation factor IF-2 ...931.6     35     31     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
527P04775    2005   SCN2A_RAT Sodium channel protein type 2 subun...931.7     35     32     53GO:0043194; C:initial segment; IDA:RGD.::GO:0033268; C:node of Ranvier; IDA:BHF-UCL.::GO:0019717; C:synaptosome; IDA:RGD.::GO:0001518; C:voltage-gated sodium channel complex; IDA:RGD.
GO:0043522; F:leucine zipper domain binding; IPI:RGD.::GO:0031402; F:sodium ion binding; IDA:RGD.::GO:0005248; F:voltage-gated sodium channel activity; IDA:RGD.
GO:0042552; P:myelination; IEP:BHF-UCL.
528Q5E7L5    893   IF2_VIBF1 Translation initiation factor IF-2 ...991.7     35     27     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
529Q2UDY8    1473   PAN1_ASPOR Actin cytoskeleton-regulatory comp...903.4     34.3     26     54GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
530Q5UQ50    1387   COLL6_MIMIV Collagen-like protein 6 OS=Acanth...493.7     33.9     37     51GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
531Q5B5B0    1484   PAN1_EMENI Actin cytoskeleton-regulatory comp...1185.1     33.5     21     54GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
532B7K5I5    143   ATPX_CYAP8 ATP synthase subunit b' OS=RF-1))....796.1     32     25     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.::GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
533Q60377    480   Y066_METJA Uncharacterized protein MJ0066 OS=...846.9     32.7     23     54
GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
534Q7VNT5    207   RNFB_HAEDU Electron transport complex protein...588.3     32     33     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
535O94913    1555   PCF11_HUMAN Pre-mRNA cleavage complex 2 prote...1128.7     32.7     25     46GO:0005849; C:mRNA cleavage factor complex; NAS:UniProtKB.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006379; P:mRNA cleavage; NAS:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
536Q54XM9    450   TAF11_DICDI Transcription initiation factor T...749.7     32.3     42     59GO:0005669; C:transcription factor TFIID complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:dictyBase.
records
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