Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR167W
Length:
152
Number of sequences:
5887
Description:
YLR167W RPS31 SGDID:S000004157, Chr XII from 498947-499405, Genome Release 64-1-1, Verified ORF, "Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q4V8W7    227   UBTD1_DANRE Ubiquitin domain-containing prote...710.00002     46.2     37     55
242A9A6I9    67   RS27A_METM6 30S ribosomal protein S27ae OS=Me...400.00002     43.9     53     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
243A9A217    57   RS27A_NITMS 30S ribosomal protein S27ae OS=Ni...430.00002     43.5     47     72GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
244Q6PGH0    234   UBTD2_MOUSE Ubiquitin domain-containing prote...700.00003     45.8     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
245C5A443    56   RS27A_THEGJ 30S ribosomal protein S27ae OS=Th...330.00003     43.1     58     70GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
246Q97BH4    55   RS27A_THEVO 30S ribosomal protein S27ae OS=15...350.00003     42.7     54     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
247Q54TK0    96   NED81_DICDI NEDD8-like protein 1 OS=Dictyoste...530.00004     43.1     40     60
248A0B8S9    49   RS27A_METTP 30S ribosomal protein S27ae OS=th...450.00005     42.4     47     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
249Q8WUN7    234   UBTD2_HUMAN Ubiquitin domain-containing prote...700.00005     45.1     30     57GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
250Q6L0P7    51   RS27A_PICTO 30S ribosomal protein S27ae OS=10...340.00005     42.4     53     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
251Q9HJ78    55   RS27A_THEAC 30S ribosomal protein S27ae OS=NB...350.00006     42.4     54     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
252Q6DG43    240   UBTD2_DANRE Ubiquitin domain-containing prote...700.00006     44.7     27     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
253P63072    162   UBD_MOUSE Ubiquitin D OS=Mus musculus (Mouse)...690.016     37.7     29     52GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070628; F:proteasome binding; ISS:UniProtKB.
GO:0070842; P:aggresome assembly; ISS:UniProtKB.::GO:0043011; P:myeloid dendritic cell differentiation; ISS:UniProtKB.::GO:0035417; P:negative regulation of mitotic prometaphase; ISS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IMP:UniProtKB.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IMP:UniProtKB.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.::GO:0034341; P:response to interferon-gamma; IEP:UniProtKB.::GO:0034612; P:response to tumor necrosis factor; IEP:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
254Q54LV1    342   RAD23_DICDI UV excision repair protein RAD23 ...610.0001     43.9     38     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
255P61239    50   RS27A_PYRHO 30S ribosomal protein S27ae OS=NB...340.0001     41.2     53     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
256Q84L33    371   RD23A_ARATH Putative DNA repair protein RAD23...910.0002     43.5     36     54GO:0005634; C:nucleus; IDA:TAIR.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
257Q8U443    50   RS27A_PYRFU 30S ribosomal protein S27ae OS=Py...340.0002     40.4     53     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
258P61238    51   RS27A_PYRAB 30S ribosomal protein S27ae OS=Py...340.0003     40     50     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:HAMAP.
GO:0006412; P:translation; IEA:HAMAP.
259P54727    409   RD23B_HUMAN UV excision repair protein RAD23 ...640.0004     42.7     36     61GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; IDA:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc.
GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
260Q4KMA2    415   RD23B_RAT UV excision repair protein RAD23 ho...640.0005     42.4     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
261P54728    416   RD23B_MOUSE UV excision repair protein RAD23 ...640.0005     42.4     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
262Q6PUA2    1786   TAF1B_ARATH Transcription initiation factor T...710.0007     42.4     32     59GO:0016020; C:membrane; IDA:TAIR.::GO:0005669; C:transcription factor TFIID complex; TAS:TAIR.
GO:0003712; F:transcription cofactor activity; TAS:TAIR.
GO:0016573; P:histone acetylation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
263P48510    373   DSK2_YEAST Ubiquitin domain-containing protei...560.001     41.6     39     57GO:0005635; C:nuclear envelope; IGI:GOC.
GO:0030674; F:protein binding, bridging; IMP:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD.
264P54031    60   RS27A_METJA 30S ribosomal protein S27ae OS=JC...320.001     38.9     53     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
265Q84L31    419   RD23C_ARATH Putative DNA repair protein RAD23...750.001     41.6     33     57GO:0005634; C:nucleus; IDA:TAIR.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
266Q5R684    589   UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii (Suma...720.002     40.8     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
267Q9UMX0    589   UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens (Huma...720.002     40.8     36     53GO:0005783; C:endoplasmic reticulum; IDA:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; NAS:UniProtKB.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0019900; F:kinase binding; IPI:UniProtKB.
GO:0006915; P:apoptotic process; IMP:HGNC.::GO:0031396; P:regulation of protein ubiquitination; IDA:HGNC.::GO:0001666; P:response to hypoxia; IMP:HGNC.
268Q99NB8    596   UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus (Mous...510.002     40.8     41     61GO:0005829; C:cytosol; IDA:MGI.::GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.
GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
269Q67W65    1810   TAF1_ORYSJ Transcription initiation factor TF...710.002     40.8     37     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
270Q9H347    655   UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens (Huma...720.002     40.8     35     56
271P61240    61   RS27A_NANEQ 30S ribosomal protein S27ae OS=Na...510.002     38.1     41     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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