Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR141W
Length:
363
Number of sequences:
5887
Description:
YLR141W RRN5 SGDID:S000004131, Chr XII from 423683-424774, Genome Release 64-1-1, Verified ORF, "Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02983    363   RRN5_YEAST RNA polymerase I-specific transcri...3630     746     100     100GO:0000500; C:RNA polymerase I upstream activating factor complex; IDA:SGD.
GO:0006325; P:chromatin organization; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
2O14013    556   RRN5_SCHPO RNA polymerase I-specific transcri...1830.0001     47.4     28     40GO:0000500; C:RNA polymerase I upstream activating factor complex; TAS:PomBase.
GO:0000182; F:rDNA binding; IDA:PomBase.::GO:0001168; F:RNA polymerase I upstream control element sequence-specific DNA binding transcription factor activity; IDA:PomBase.
3O59923    519   SIR2_CANAL NAD-dependent histone deacetylase ...1050.9     35     30     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0070403; F:NAD+ binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IMP:CGD.::GO:0001319; P:inheritance of oxidatively modified proteins involved in replicative cell aging; IMP:CGD.::GO:0006476; P:protein deacetylation; IEA:InterPro.::GO:0045595; P:regulation of cell differentiation; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 3 1 - 3
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::