Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR136C
Length:
285
Number of sequences:
5887
Description:
YLR136C TIS11 SGDID:S000004126, Chr XII from 416658-415801, Genome Release 64-1-1, reverse complement, Verified ORF, "mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q94AD9    404   C3H3_ARATH Zinc finger CCCH domain-containing...770.61     35     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
92Q6NPN3    465   C3H58_ARATH Zinc finger CCCH domain-containin...650.96     34.7     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
93Q657B3    698   C3H7_ORYSJ Zinc finger CCCH domain-containing...950.54     35.4     26     39
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
94Q7ZWS1    640   DUS3L_XENLA tRNA-dihydrouridine(47) synthase ...950.55     35.4     28     47
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
95Q9DD48    423   MKRN2_SERQU Probable E3 ubiquitin-protein lig...550.57     35     35     45
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
96Q0CZL3    719   DUS3_ASPTN tRNA-dihydrouridine(47) synthase [...1930.58     35.4     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
97B0F0H3    409   MKRN2_XENLA Probable E3 ubiquitin-protein lig...780.59     35     32     44GO:0005622; C:intracellular; IC:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009798; P:axis specification; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; IMP:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.
98Q8GW05    388   C3H47_ORYSJ Zinc finger CCCH domain-containin...660.59     35     30     48
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
99Q4WKD9    254   YTH1_ASPFU mRNA 3'-end-processing protein yth...690.66     34.7     32     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
100Q5ZA07    368   C3H41_ORYSJ E3 ubiquitin-protein ligase makor...830.68     35     31     45
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
101Q9STM4    448   C3H43_ARATH Zinc finger CCCH domain-containin...722     33.5     31     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
102Q2QTY2    529   C3H65_ORYSJ Zinc finger CCCH domain-containin...770.72     35     27     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
103Q9FNG6    378   C3H51_ARATH Zinc finger CCCH domain-containin...620.73     34.7     24     52GO:0016020; C:membrane; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
104A6QYC6    741   DUS3_AJECN tRNA-dihydrouridine(47) synthase [...540.73     35     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
105Q5BGN2    254   YTH1_EMENI mRNA 3'-end-processing protein yth...762.4     33.1     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
106A1D1U0    726   DUS3_NEOFI tRNA-dihydrouridine(47) synthase [...980.89     34.7     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
107Q752S4    250   CWC24_ASHGO Pre-mRNA-splicing factor CWC24 OS...610.93     34.3     28     48GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
108Q6K4V3    326   C3H15_ORYSJ Zinc finger CCCH domain-containin...620.95     34.3     24     52
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
109Q0DA50    665   C3H45_ORYSJ Zinc finger CCCH domain-containin...810.98     34.7     28     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
110Q2URI6    255   YTH1_ASPOR mRNA 3'-end-processing protein yth...642.5     33.1     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
111Q5NU13    402   MKRN2_TAKRU Probable E3 ubiquitin-protein lig...931.2     34.3     27     43
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
112O48772    453   C3H26_ARATH Zinc finger CCCH domain-containin...584.5     32.3     31     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
113Q5JLB5    439   C3H12_ORYSJ Zinc finger CCCH domain-containin...781.3     34.3     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
114Q8GX84    343   C3H1_ARATH Zinc finger CCCH domain-containing...621.3     33.9     24     52
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
115Q9DFG8    414   MKRN2_DANRE Probable E3 ubiquitin-protein lig...551.5     33.9     35     45GO:0005622; C:intracellular; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
116Q688R3    601   C3H33_ORYSJ Zinc finger CCCH domain-containin...871.5     34.3     34     46
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
117Q54DA5    373   ZC3HF_DICDI Zinc finger CCCH domain-containin...711.5     33.9     27     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
118Q86B79    599   UNK_DROME RING finger protein unkempt OS=Dros...553.9     32.7     33     51GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0008407; P:chaeta morphogenesis; IMP:UniProtKB.::GO:0048749; P:compound eye development; IMP:FlyBase.::GO:0007476; P:imaginal disc-derived wing morphogenesis; IMP:UniProtKB.::GO:0002164; P:larval development; IMP:UniProtKB.
119Q338N2    702   C3H62_ORYSJ Zinc finger CCCH domain-containin...221.7     33.9     50     68
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
120Q9SQU4    462   C3H34_ARATH Zinc finger CCCH domain-containin...853     33.1     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
121P93755    716   C3H30_ARATH Zinc finger CCCH domain-containin...931.9     33.9     27     43
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
records
Previous ‹‹ ›› Next Total records: 158 91 - 120
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::