rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
121 | P93755 | 716 | C3H30_ARATH Zinc finger CCCH domain-containin... | 93 | 1.9 | 33.9 | 27 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR. | 122 | Q8BYK8 | 1177 | ZC3H6_MOUSE Zinc finger CCCH domain-containin... | 62 | 2 | 33.9 | 31 | 45 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 123 | Q6P158 | 1386 | DHX57_HUMAN Putative ATP-dependent RNA helica... | 22 | 2 | 33.9 | 59 | 82 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 124 | A9LNK9 | 631 | CPSF_ARATH Cleavage and polyadenylation speci... | 80 | 2 | 33.5 | 28 | 44 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 125 | Q5BF62 | 714 | DUS3_EMENI tRNA-dihydrouridine(47) synthase [... | 49 | 2.1 | 33.5 | 35 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 126 | Q8L7N8 | 375 | C3H57_ARATH Zinc finger CCCH domain-containin... | 77 | 2.2 | 33.5 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 127 | Q941Q3 | 524 | C3H37_ARATH Zinc finger CCCH domain-containin... | 79 | 4.9 | 32.3 | 25 | 38 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001709; P:cell fate determination; TAS:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 128 | P61129 | 1189 | ZC3H6_HUMAN Zinc finger CCCH domain-containin... | 60 | 2.4 | 33.5 | 32 | 47 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 129 | Q9SY74 | 757 | C3H5_ARATH Zinc finger CCCH domain-containing... | 121 | 2.4 | 33.5 | 29 | 45 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 130 | Q06053 | 668 | DUS3_YEAST tRNA-dihydrouridine(47) synthase [... | 49 | 2.6 | 33.1 | 35 | 47 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006400; P:tRNA modification; IMP:SGD. | 131 | A7A1S5 | 668 | DUS3_YEAS7 tRNA-dihydrouridine(47) synthase [... | 49 | 2.6 | 33.1 | 35 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 132 | Q10M00 | 688 | C3H22_ORYSJ Zinc finger CCCH domain-containin... | 32 | 2.9 | 33.1 | 44 | 56 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 133 | Q6P5D3 | 1388 | DHX57_MOUSE Putative ATP-dependent RNA helica... | 38 | 3 | 33.1 | 47 | 68 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 134 | P0CQ64 | 329 | CWC24_CRYNJ Pre-mRNA-splicing factor CWC24 OS... | 50 | 3.1 | 32.7 | 30 | 48 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 135 | P0CQ65 | 329 | CWC24_CRYNB Pre-mRNA-splicing factor CWC24 OS... | 50 | 3.1 | 32.7 | 30 | 48 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 136 | Q93XW7 | 437 | C3H40_ARATH Zinc finger CCCH domain-containin... | 32 | 3.1 | 33.1 | 47 | 56 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 137 | Q9R9J1 | 3971 | MYCA_BACIU Mycosubtilin synthase subunit A OS... | 177 | 3.2 | 33.1 | 21 | 41 | | | | | | | | | | | GO:0000036; F:acyl carrier activity; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0031177; F:phosphopantetheine binding; IEA:InterPro.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.::GO:0008483; F:transaminase activity; IEA:InterPro. | | | | | | | | | | GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW. | 138 | Q1E2F4 | 724 | DUS3_COCIM tRNA-dihydrouridine(47) synthase [... | 201 | 3.4 | 33.1 | 22 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 139 | Q8IWR0 | 971 | Z3H7A_HUMAN Zinc finger CCCH domain-containin... | 26 | 3.7 | 32.7 | 46 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 140 | Q8GXX7 | 397 | C3H33_ARATH Zinc finger CCCH domain-containin... | 77 | 3.8 | 32.7 | 27 | 48 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:TAIR.::GO:0048027; F:mRNA 5'-UTR binding; IPI:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0010313; F:phytochrome binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0017148; P:negative regulation of translation; IMP:TAIR. | 141 | Q9P6R8 | 533 | CWC24_SCHPO Pre-mRNA-splicing factor cwf24 OS... | 25 | 4.8 | 32.3 | 40 | 64 | GO:0005681; C:spliceosomal complex; IDA:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008080; F:N-acetyltransferase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.::GO:0016074; P:snoRNA metabolic process; NAS:PomBase. | 142 | Q6GLD9 | 418 | MKRN2_XENTR Probable E3 ubiquitin-protein lig... | 55 | 5.3 | 32.3 | 31 | 44 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009798; P:axis specification; ISS:BHF-UCL.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB. | 143 | Q31IV8 | 329 | RPOA_THICR DNA-directed RNA polymerase subuni... | 121 | 5.3 | 32 | 30 | 41 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro. | | | | | | | | | | | 144 | A5DTS1 | 642 | DUS3_LODEL tRNA-dihydrouridine(47) synthase [... | 51 | 5.4 | 32.3 | 35 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 145 | Q6CSS6 | 229 | CWC24_KLULA Pre-mRNA-splicing factor CWC24 OS... | 51 | 6.1 | 31.6 | 31 | 47 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 146 | Q9CQR5 | 170 | ZMAT5_MOUSE Zinc finger matrin-type protein 5... | 20 | 6.4 | 31.2 | 50 | 65 | GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 147 | Q9UDW3 | 170 | ZMAT5_HUMAN Zinc finger matrin-type protein 5... | 20 | 6.4 | 31.2 | 50 | 65 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005689; C:U12-type spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IC:HGNC. | 148 | Q2TA39 | 170 | ZMAT5_BOVIN Zinc finger matrin-type protein 5... | 32 | 6.7 | 31.2 | 44 | 56 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 149 | Q758T3 | 209 | YTH1_ASHGO mRNA 3'-end-processing protein YTH... | 79 | 7 | 31.2 | 30 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 150 | Q93ZS9 | 580 | C3H47_ARATH Zinc finger CCCH domain-containin... | 45 | 7.1 | 32 | 36 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.::GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 151 | P0CR14 | 342 | CWC2_CRYNJ Pre-mRNA-splicing factor CWC2 OS=A... | 99 | 7.2 | 31.6 | 24 | 38 | GO:0000974; C:Prp19 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; ISS:UniProtKB. |