Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR135W
Length:
748
Number of sequences:
5887
Description:
YLR135W SLX4 SGDID:S000004125, Chr XII from 413281-415527, Genome Release 64-1-1, Verified ORF, "Endonuclease involved in processing DNA during recombination and repair; cleaves branched structures in a complex with Slx1p; involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12098    748   SLX4_YEAST Structure-specific endonuclease su...7480     1531     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033557; C:Slx1-Slx4 complex; IPI:SGD.
GO:0017108; F:5'-flap endonuclease activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006261; P:DNA-dependent DNA replication; IGI:SGD.::GO:0000736; P:double-strand break repair via single-strand annealing, removal of nonhomologous ends; IMP:SGD.
2B5VN64    748   SLX4_YEAS6 Structure-specific endonuclease su...7480     1531     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
3B3LT96    748   SLX4_YEAS1 Structure-specific endonuclease su...7480     1531     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
4A7A134    748   SLX4_YEAS7 Structure-specific endonuclease su...7480     1515     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
5A7TEM0    680   SLX4_VANPO Structure-specific endonuclease su...6777e-67     239     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
6C5DMW3    658   SLX4_LACTC Structure-specific endonuclease su...6893e-53     199     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
7Q6FJQ6    726   SLX4_CANGA Structure-specific endonuclease su...8054e-51     194     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
8C5DY61    549   SLX4_ZYGRC Structure-specific endonuclease su...2723e-26     117     33     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
9Q6CQJ9    692   SLX4_KLULA Structure-specific endonuclease su...6821e-30     132     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
10Q750B5    498   SLX4_ASHGO Structure-specific endonuclease su...1180.000000001     65.1     29     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
11C4R5N0    652   SLX4_PICPG Structure-specific endonuclease su...2540.00003     51.2     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
12Q6BP70    788   SLX4_DEBHA Structure-specific endonuclease su...1150.13     39.3     26     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
13C5M2G8    714   SLX42_CANTT Structure-specific endonuclease s...1570.002     45.4     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
14C5M2G0    714   SLX41_CANTT Structure-specific endonuclease s...1570.004     44.3     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
15B9WFW5    784   SLX4_CANDC Structure-specific endonuclease su...1870.02     42     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
16Q5AFV3    776   SLX4_CANAL Structure-specific endonuclease su...860.026     41.6     36     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
17A5DIU9    681   SLX4_PICGU Structure-specific endonuclease su...1140.36     38.1     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
18Q2W0H5    457   MURD_MAGSA UDP-N-acetylmuramoylalanine--D-glu...440.38     37.7     39     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004326; F:tetrahydrofolylpolyglutamate synthase activity; IEA:InterPro.::GO:0008764; F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity; IEA:EC.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
19A3GGG8    782   SLX4_PICST Structure-specific endonuclease su...1206.7     33.9     23     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
20Q97BC2    420   RFCL_THEVO Replication factor C large subunit...1327.3     33.5     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
21A3LXM3    442   SHE3_PICST SWI5-dependent HO expression prote...1057.6     33.5     27     50GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
records
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