rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q54Z08 | 850 | SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=D... | 155 | 3.5 | 34.7 | 24 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 32 | Q52DF3 | 832 | SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=b... | 144 | 7.5 | 33.5 | 24 | 42 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 33 | Q9JLI8 | 962 | SART3_MOUSE Squamous cell carcinoma antigen r... | 94 | 0.0005 | 47 | 35 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 34 | Q7S1Y0 | 1167 | RNA14_NEUCR mRNA 3'-end-processing protein rn... | 47 | 1.7 | 35.8 | 32 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 35 | Q9FNS4 | 662 | MBB1_CHLRE PsbB mRNA maturation factor Mbb1, ... | 153 | 0.5 | 37.4 | 20 | 42 | GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 36 | Q05022 | 1729 | RRP5_YEAST rRNA biogenesis protein RRP5 OS=Sa... | 188 | 4.6 | 34.3 | 22 | 42 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD. | | | | | | | | | | GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000464; P:endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD. | 37 | O74835 | 1690 | RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Sc... | 97 | 3.4 | 34.7 | 25 | 45 | GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase. | | | | | | | | | | GO:0042134; F:rRNA primary transcript binding; ISS:PomBase.::GO:0030515; F:snoRNA binding; ISS:PomBase. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; ISS:PomBase. | 38 | P39682 | 629 | PRP39_YEAST Pre-mRNA-processing factor 39 OS=... | 143 | 0.003 | 44.7 | 24 | 43 | GO:0000243; C:commitment complex; IGI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IGI:SGD. | 39 | Q7SAK5 | 829 | SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=... | 139 | 9 | 33.1 | 25 | 40 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 40 | O94906 | 941 | PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Ho... | 145 | 3.4 | 34.7 | 22 | 41 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:BHF-UCL.::GO:0005682; C:U5 snRNP; IDA:BHF-UCL. | | | | | | | | | | GO:0050681; F:androgen receptor binding; IPI:MGI.::GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IGI:MGI. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB. | 41 | A1A5S1 | 941 | PRP6_RAT Pre-mRNA-processing factor 6 OS=Ratt... | 112 | 6.8 | 33.9 | 24 | 39 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 42 | Q2KJJ0 | 941 | PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bo... | 145 | 2 | 35.4 | 22 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 43 | A7MB10 | 1874 | RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus... | 71 | 0.21 | 38.9 | 34 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 44 | Q91YR7 | 941 | PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mu... | 148 | 0.98 | 36.6 | 22 | 39 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 45 | Q6NS46 | 1862 | RRP5_MOUSE Protein RRP5 homolog OS=Mus muscul... | 72 | 0.33 | 38.1 | 31 | 50 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 46 | Q7KRW8 | 1066 | PRP39_DROME Pre-mRNA-processing factor 39 OS=... | 140 | 2.6 | 35 | 24 | 42 | GO:0005685; C:U1 snRNP; ISS:FlyBase. | | | | | | | | | | GO:0031072; F:heat shock protein binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 47 | Q14690 | 1871 | RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie... | 194 | 1.8 | 35.8 | 19 | 43 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 48 | Q5RCC2 | 941 | PRP6_PONAB Pre-mRNA-processing factor 6 OS=Po... | 143 | 7.2 | 33.5 | 21 | 38 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 49 | Q12381 | 906 | PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=S... | 485 | 2.9 | 35 | 21 | 37 | GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase. | 50 | Q86UA1 | 669 | PRP39_HUMAN Pre-mRNA-processing factor 39 OS=... | 427 | 0.06 | 40.4 | 19 | 36 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 51 | Q1JPZ7 | 752 | PRP39_DANRE Pre-mRNA-processing factor 39 OS=... | 143 | 0.034 | 41.2 | 27 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 52 | Q4P7S1 | 1081 | SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=U... | 107 | 1.3 | 36.2 | 27 | 45 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 53 | P0CO08 | 1031 | SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=A... | 73 | 0.21 | 38.5 | 30 | 59 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 54 | P0CO09 | 1031 | SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=(... | 73 | 0.21 | 38.5 | 30 | 59 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 55 | Q9LEM8 | 1385 | NAC2_CHLRE PsbD mRNA maturation factor Nac2, ... | 134 | 0.049 | 40.8 | 25 | 45 | GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 56 | Q5B3I8 | 1075 | RNA14_EMENI mRNA 3'-end-processing protein rn... | 96 | 0.31 | 38.1 | 30 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 57 | Q4KLU2 | 641 | PRP39_XENLA Pre-mRNA-processing factor 39 OS=... | 121 | 1.6 | 35.8 | 22 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 58 | Q6CAR6 | 736 | SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=l... | 143 | 0.79 | 36.6 | 26 | 41 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 59 | Q6C8L8 | 806 | RNA14_YARLI mRNA 3'-end-processing protein RN... | 98 | 9.4 | 33.1 | 20 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 60 | Q4WXX4 | 1029 | RNA14_ASPFU mRNA 3'-end-processing protein rn... | 83 | 0.83 | 36.6 | 23 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 61 | Q8DCT7 | 228 | GPH_VIBVU Phosphoglycolate phosphatase OS=Vib... | 109 | 0.16 | 38.1 | 27 | 48 | | | | | | | | | | | GO:0008967; F:phosphoglycolate phosphatase activity; IEA:EC. | | | | | | | | | | GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW. |