Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR105C
Length:
377
Number of sequences:
5887
Description:
YLR105C SEN2 SGDID:S000004095, Chr XII from 348180-347047, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P16658    377   SEN2_YEAST tRNA-splicing endonuclease subunit...3770     787     100     100GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0005741; C:mitochondrial outer membrane; IDA:SGD.::GO:0000214; C:tRNA-intron endonuclease complex; IDA:SGD.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000213; F:tRNA-intron endonuclease activity; IDA:SGD.
GO:0000379; P:tRNA-type intron splice site recognition and cleavage; IDA:SGD.
2Q74ZY5    356   SEN2_ASHGO tRNA-splicing endonuclease subunit...3798e-115     345     50     63GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
3Q8TFH7    380   SEN2_SCHPO Probable tRNA-splicing endonucleas...3994e-39     148     29     47GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.::GO:0000214; C:tRNA-intron endonuclease complex; ISS:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; ISS:PomBase.
GO:0000379; P:tRNA-type intron splice site recognition and cleavage; ISS:PomBase.
4Q6P7W5    460   SEN2_MOUSE tRNA-splicing endonuclease subunit...1756e-18     88.6     33     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
5Q5ZIN2    461   SEN2_CHICK tRNA-splicing endonuclease subunit...2431e-17     87.4     28     47GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
6Q5M954    463   SEN2_RAT tRNA-splicing endonuclease subunit S...1742e-17     87     32     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
7Q9P6Y2    633   SEN2_NEUCR Probable tRNA-splicing endonucleas...1480.0000000001     66.6     34     45
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
8Q8NCE0    465   SEN2_HUMAN tRNA-splicing endonuclease subunit...1710.00000000000002     78.2     29     49GO:0005813; C:centrosome; IDA:HPA.::GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IDA:UniProtKB.
9Q9M1E8    237   SEN21_ARATH tRNA-splicing endonuclease subuni...2150.00000000002     67     26     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
10Q97ZY3    182   ENDA_SULSO tRNA-splicing endonuclease OS=P2)....1230.0000000005     61.6     34     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
11C3NGJ0    182   ENDA_SULIN tRNA-splicing endonuclease OS=Sulf...1260.0000000008     61.2     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
12C3N746    182   ENDA_SULIY tRNA-splicing endonuclease OS=Sulf...1260.0000000008     61.2     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
13C3MQX7    182   ENDA_SULIL tRNA-splicing endonuclease OS=Sulf...1260.0000000008     61.2     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
14C4KIA4    182   ENDA_SULIK tRNA-splicing endonuclease OS=Sulf...1260.000000001     60.8     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
15C3N6N2    182   ENDA_SULIA tRNA-splicing endonuclease OS=Sulf...1260.000000001     60.8     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
16C3MWW5    182   ENDA_SULIM tRNA-splicing endonuclease OS=Sulf...1260.000000001     60.8     32     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
17Q9LSS3    250   SEN22_ARATH tRNA-splicing endonuclease subuni...1580.00000001     58.9     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
18A1RSY7    183   ENDA_PYRIL tRNA-splicing endonuclease OS=Pyro...860.00000002     57     36     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
19B1Y9D1    183   ENDA_THENV tRNA-splicing endonuclease OS=Ther...860.00000006     55.5     36     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
20Q975R3    180   ENDA_SULTO tRNA-splicing endonuclease OS=Sulf...910.0000001     54.3     32     46
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
21A4WLV3    183   ENDA_PYRAR tRNA-splicing endonuclease OS=Pyro...800.0000003     53.5     35     54
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
22A2BIW2    181   ENDA_HYPBU tRNA-splicing endonuclease OS=Hype...780.0000006     52.4     33     50
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
23Q8ZVI1    183   ENDA_PYRAE tRNA-splicing endonuclease OS=/ NB...860.000001     51.6     33     52
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
24Q4JAF4    181   ENDA_SULAC tRNA-splicing endonuclease OS=NBRC...1130.000002     51.2     24     43
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
25Q46FK9    350   ENDA_METBF tRNA-splicing endonuclease OS=Meth...1310.000005     51.6     27     49
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
26Q9YBF1    186   ENDA_AERPE tRNA-splicing endonuclease OS=1001...750.00002     48.5     35     47
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
27O07165    170   ENDA_METTH tRNA-splicing endonuclease OS=ther...760.0001     45.4     28     55
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
28Q8TGZ7    179   ENDA_METKA tRNA-splicing endonuclease OS=1009...920.0002     45.4     25     46
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
29Q5Z6B1    293   SEN2_ORYSJ Probable tRNA-splicing endonucleas...460.0002     46.2     41     59GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
30Q8PZI1    353   ENDA_METMA tRNA-splicing endonuclease OS=JCM ...1310.0003     46.2     28     47
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
31B6YXU4    171   ENDA_THEON tRNA-splicing endonuclease OS=Ther...1210.0003     44.7     26     48
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000213; F:tRNA-intron endonuclease activity; IEA:EC.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
records
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