Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR067C
Length:
965
Number of sequences:
5887
Description:
YLR067C PET309 SGDID:S000004057, Chr XII from 270710-267813, Genome Release 64-1-1, reverse complement, Verified ORF, "Specific translational activator for the COX1 mRNA, also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains seven pentatricopeptide repeats (PPRs)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q9FNL2    472   PP418_ARATH Pentatricopeptide repeat-containi...3560.14     39.7     20     39
GO:0005488; F:binding; IEA:InterPro.
92Q8GYP6    860   PPR49_ARATH Pentatricopeptide repeat-containi...1520.98     37     18     43
GO:0005488; F:binding; IEA:InterPro.
93Q9CA58    763   PP120_ARATH Putative pentatricopeptide repeat...3761.4     36.6     20     33
GO:0005488; F:binding; IEA:InterPro.
94Q9LYZ9    819   PP362_ARATH Pentatricopeptide repeat-containi...1223.7     35     17     41
GO:0005488; F:binding; IEA:InterPro.
95Q84J46    540   PP262_ARATH Pentatricopeptide repeat-containi...2561.2     36.6     20     42
GO:0005488; F:binding; IEA:InterPro.
96Q9T0D6    566   PP306_ARATH Pentatricopeptide repeat-containi...3625.4     34.7     20     36
97Q0WLC6    1089   PP349_ARATH Pentatricopeptide repeat-containi...2977.5     34.3     22     37GO:0009507; C:chloroplast; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
GO:0048255; P:mRNA stabilization; IMP:TAIR.
98B3H4P1    661   PP450_ARATH Pentatricopeptide repeat-containi...1382.5     35.4     21     46
GO:0005488; F:binding; IEA:InterPro.
99Q9FIX3    747   PP407_ARATH Pentatricopeptide repeat-containi...2072.8     35.4     18     41
GO:0005488; F:binding; IEA:InterPro.
100Q9SIC9    918   PP178_ARATH Pentatricopeptide repeat-containi...3360.071     40.8     19     39GO:0009507; C:chloroplast; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.
GO:0010019; P:chloroplast-nucleus signaling pathway; IMP:TAIR.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:TAIR.
101O80958    867   PP194_ARATH Pentatricopeptide repeat-containi...3441.3     36.6     17     38GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
102Q9S7R4    482   PP125_ARATH Pentatricopeptide repeat-containi...2681.5     36.2     19     38GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0008380; P:RNA splicing; IGI:TAIR.
103Q9C9H9    745   PP114_ARATH Pentatricopeptide repeat-containi...1270.094     40.4     23     45
GO:0005488; F:binding; IEA:InterPro.
104Q5SGE0    1392   LPPRC_RAT Leucine-rich PPR motif-containing p...990.1     40.4     22     47GO:0000794; C:condensed nuclear chromosome; ISS:HGNC.::GO:0005856; C:cytoskeleton; ISS:HGNC.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.::GO:0005640; C:nuclear outer membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.
GO:0048487; F:beta-tubulin binding; ISS:HGNC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
105P0C8A0    638   PP275_ARATH Pentatricopeptide repeat-containi...2250.11     40     20     41
GO:0005488; F:binding; IEA:InterPro.
106Q8GYM2    483   PP393_ARATH Pentatricopeptide repeat-containi...1020.82     37     21     44
107Q9LQ14    629   PPR96_ARATH Pentatricopeptide repeat-containi...2582.6     35.4     19     41GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IMP:TAIR.
108Q10451    1261   PPR5_SCHPO Pentatricopeptide repeat-containin...2560.17     39.7     20     43GO:0005737; C:cytoplasm; IDA:PomBase.
109Q9LUJ4    562   PP248_ARATH Pentatricopeptide repeat-containi...1741.4     36.6     17     41GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
110Q7X6A5    477   PPR81_ARATH Pentatricopeptide repeat-containi...1481.9     35.8     16     39
111Q9LSK8    688   PP240_ARATH Pentatricopeptide repeat-containi...1990.19     39.3     18     42
112O49711    843   PP335_ARATH Pentatricopeptide repeat-containi...2350.2     39.3     21     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
113Q9SZ10    521   PP338_ARATH Pentatricopeptide repeat-containi...4450.21     38.9     17     36GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
114Q9M1D8    473   PP288_ARATH Pentatricopeptide repeat-containi...830.4     38.1     27     47
GO:0005488; F:binding; IEA:InterPro.
115Q9FFE3    535   PP388_ARATH Pentatricopeptide repeat-containi...3810.27     38.5     19     38GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
116O81028    799   PP171_ARATH Pentatricopeptide repeat-containi...2060.29     38.9     21     41GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
117Q9SV96    563   PP358_ARATH Pentatricopeptide repeat-containi...1560.32     38.5     22     44GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
118Q9LS25    711   PP420_ARATH Pentatricopeptide repeat-containi...2410.35     38.5     18     37GO:0009507; C:chloroplast; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
119Q9FNG8    1030   PP366_ARATH Putative pentatricopeptide repeat...1150.36     38.5     17     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
120O80488    484   PPR23_ARATH Pentatricopeptide repeat-containi...1530.36     38.1     23     42
GO:0005488; F:binding; IEA:InterPro.
121Q66GP4    609   PP379_ARATH Pentatricopeptide repeat-containi...1910.4     38.1     18     42GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0009658; P:chloroplast organization; IMP:TAIR.
records
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