Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR067C
Length:
965
Number of sequences:
5887
Description:
YLR067C PET309 SGDID:S000004057, Chr XII from 270710-267813, Genome Release 64-1-1, reverse complement, Verified ORF, "Specific translational activator for the COX1 mRNA, also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains seven pentatricopeptide repeats (PPRs)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q66GP4    609   PP379_ARATH Pentatricopeptide repeat-containi...1910.4     38.1     18     42GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0009658; P:chloroplast organization; IMP:TAIR.
122Q9SAJ5    780   PP133_ARATH Pentatricopeptide repeat-containi...1759     33.9     22     38
GO:0005488; F:binding; IEA:InterPro.
123Q94JX6    459   PP391_ARATH Pentatricopeptide repeat-containi...1190.47     37.7     19     40GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
124Q9MAG8    471   PPR79_ARATH Putative pentatricopeptide repeat...1271.6     36.2     24     43
GO:0005488; F:binding; IEA:InterPro.
GO:0009790; P:embryo development; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0048367; P:shoot development; IMP:TAIR.
125Q9LSB8    687   PP235_ARATH Putative pentatricopeptide repeat...2330.57     37.7     20     39
GO:0005488; F:binding; IEA:InterPro.
126Q9FI49    534   PP428_ARATH Pentatricopeptide repeat-containi...2130.59     37.7     24     41
GO:0005488; F:binding; IEA:InterPro.
127P0C7R3    512   PP106_ARATH Pentatricopeptide repeat-containi...1061.4     36.2     24     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
128O23337    722   PP311_ARATH Pentatricopeptide repeat-containi...1797.1     34.3     18     42
GO:0005488; F:binding; IEA:InterPro.
129Q9SFV9    880   PP218_ARATH Pentatricopeptide repeat-containi...3190.69     37.4     21     40GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
130Q9LVA2    982   PP443_ARATH Pentatricopeptide repeat-containi...1791.9     36.2     20     46
GO:0005488; F:binding; IEA:InterPro.
131Q9LQQ1    459   PPR20_ARATH Pentatricopeptide repeat-containi...1020.7     37.4     23     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
132Q940A6    838   PP325_ARATH Pentatricopeptide repeat-containi...983.7     35     19     45GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
133O42955    687   CCM1_SCHPO Pentatricopeptide repeat-containin...1750.93     37     23     40GO:0005739; C:mitochondrion; IDA:PomBase.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
134Q8GWE0    702   PP314_ARATH Pentatricopeptide repeat-containi...930.96     37     22     40GO:0009570; C:chloroplast stroma; IDA:TAIR.
GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009658; P:chloroplast organization; IMP:TAIR.
135Q9SVH3    727   PP328_ARATH Pentatricopeptide repeat-containi...2691.9     36.2     18     36
GO:0005488; F:binding; IEA:InterPro.
136Q9LG23    398   PPR82_ARATH Pentatricopeptide repeat-containi...961     36.6     24     42GO:0005739; C:mitochondrion; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
137O80647    836   PP195_ARATH Pentatricopeptide repeat-containi...3241     37     19     40
GO:0005488; F:binding; IEA:InterPro.
138Q9S7Q2    862   PP124_ARATH Pentatricopeptide repeat-containi...3091.7     36.2     17     39GO:0009507; C:chloroplast; IDA:TAIR.::GO:0009508; C:plastid chromosome; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0042793; P:transcription from plastid promoter; IMP:TAIR.
139P42704    1394   LPPRC_HUMAN Leucine-rich PPR motif-containing...3751.6     36.2     19     37GO:0000794; C:condensed nuclear chromosome; IDA:HGNC.::GO:0005856; C:cytoskeleton; IDA:HGNC.::GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.::GO:0005640; C:nuclear outer membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IDA:HGNC.
GO:0048487; F:beta-tubulin binding; IDA:HGNC.::GO:0008017; F:microtubule binding; TAS:HGNC.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0047497; P:mitochondrion transport along microtubule; TAS:HGNC.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
140Q6NQ81    821   PP304_ARATH Pentatricopeptide repeat-containi...1581.2     36.6     18     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
141Q9LQ16    632   PPR94_ARATH Pentatricopeptide repeat-containi...3471.2     36.6     18     37
GO:0005488; F:binding; IEA:InterPro.
142Q9LMH5    883   PPR42_ARATH Putative pentatricopeptide repeat...935.4     34.7     17     46
GO:0005488; F:binding; IEA:InterPro.
GO:0009790; P:embryo development; IMP:TAIR.
143Q9ZUE9    536   PP149_ARATH Pentatricopeptide repeat-containi...1041.3     36.6     21     47
GO:0005488; F:binding; IEA:InterPro.
144Q9ZUT5    657   PP191_ARATH Pentatricopeptide repeat-containi...921.3     36.6     26     41
GO:0005488; F:binding; IEA:InterPro.
145Q0WP85    509   PP150_ARATH Pentatricopeptide repeat-containi...1576.4     34.3     18     39GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
146Q9FX35    568   PP117_ARATH Pentatricopeptide repeat-containi...1481.6     36.2     18     41GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
147Q9ZQ74    689   PP146_ARATH Pentatricopeptide repeat-containi...1051.7     36.2     25     46GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
148Q9SAH2    540   PP137_ARATH Pentatricopeptide repeat-containi...1121.7     36.2     22     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
149Q9LVQ5    1096   PP432_ARATH Pentatricopeptide repeat-containi...805.4     34.7     21     48
150Q9FND7    612   PP410_ARATH Putative pentatricopeptide repeat...661.9     35.8     36     53
GO:0005488; F:binding; IEA:InterPro.
151Q9M8W9    508   PP211_ARATH Pentatricopeptide repeat-containi...2462.3     35.4     21     37GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
records
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