Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR059C
Length:
269
Number of sequences:
5887
Description:
YLR059C REX2 SGDID:S000004049, Chr XII from 260547-259738, Genome Release 64-1-1, reverse complement, Verified ORF, "3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P54964    269   ORN_YEAST Oligoribonuclease, mitochondrial OS...2690     566     100     100GO:0005739; C:mitochondrion; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.
2O94626    180   ORN_SCHPO Probable oligoribonuclease OS=Schiz...1871e-49     167     47     66GO:0005829; C:cytosol; IDA:PomBase.::GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; ISS:PomBase.
3Q556Y2    190   ORN_DICDI Probable oligoribonuclease OS=Dicty...1788e-43     150     44     63GO:0005739; C:mitochondrion; ISS:dictyBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:dictyBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0016070; P:RNA metabolic process; IC:dictyBase.
4Q9D8S4    237   ORN_MOUSE Oligoribonuclease, mitochondrial OS...2033e-41     147     41     59GO:0005739; C:mitochondrion; IDA:MGI.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
5Q5U1X1    237   ORN_RAT Oligoribonuclease, mitochondrial OS=R...2035e-41     147     41     59GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
6A2VE52    237   ORN_BOVIN Oligoribonuclease, mitochondrial OS...1799e-41     146     44     61GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
7Q9Y3B8    237   ORN_HUMAN Oligoribonuclease, mitochondrial OS...1793e-40     145     44     61GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0008408; F:3'-5' exonuclease activity; IDA:MGI.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0009117; P:nucleotide metabolic process; TAS:ProtInc.
8Q9VCI0    211   ORN_DROME Probable oligoribonuclease OS=Droso...1964e-40     144     43     61GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
9Q31HZ4    184   ORN_THICR Oligoribonuclease OS=Thiomicrospira...1888e-40     142     41     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
10A0QDA8    215   ORN_MYCA1 Oligoribonuclease OS=Mycobacterium ...2124e-39     141     40     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
11P61651    215   ORN_MYCPA Oligoribonuclease OS=Mycobacterium ...2126e-39     141     40     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
12Q0SGU7    199   ORN_RHOSR Oligoribonuclease OS=Rhodococcus sp...1833e-38     139     41     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
13Q6A786    202   ORN_PROAC Oligoribonuclease OS=Propionibacter...1905e-38     138     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
14Q8Y0V1    219   ORN_RALSO Oligoribonuclease OS=Ralstonia sola...2066e-38     138     39     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
15Q5Z0A9    216   ORN_NOCFA Oligoribonuclease OS=Nocardia farci...1873e-37     136     40     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
16Q1B5T7    215   ORN_MYCSS Oligoribonuclease OS=Mycobacterium ...2174e-37     136     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
17A1UJ99    215   ORN_MYCSK Oligoribonuclease OS=Mycobacterium ...2174e-37     136     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
18A3Q2P5    215   ORN_MYCSJ Oligoribonuclease OS=Mycobacterium ...2174e-37     136     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
19Q9JXW1    187   ORN_NEIMB Oligoribonuclease OS=Neisseria meni...1815e-37     135     39     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
20Q4ZYY8    178   ORN_PSEU2 Oligoribonuclease OS=Pseudomonas sy...1883e-36     133     39     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
21Q48P10    178   ORN_PSE14 Oligoribonuclease OS=Pseudomonas sy...1883e-36     132     39     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
22Q9JW09    187   ORN_NEIMA Oligoribonuclease OS=Neisseria meni...1814e-36     132     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
23Q9ZVE0    222   ORN_ARATH Oligoribonuclease OS=Arabidopsis th...1847e-36     133     39     62GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
24A1KS35    187   ORN_NEIMF Oligoribonuclease OS=FAM18). GN=orn...1811e-35     131     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
25Q5FAH8    187   ORN_NEIG1 Oligoribonuclease OS=Neisseria gono...1811e-35     131     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
26Q65SE1    186   ORN_MANSM Oligoribonuclease OS=Mannheimia suc...1871e-35     131     39     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
27Q47VZ4    181   ORN_COLP3 Oligoribonuclease OS=psychroerythus...1821e-35     131     42     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
28A0PU74    215   ORN_MYCUA Oligoribonuclease OS=Mycobacterium ...2154e-35     130     37     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
29A5UFF2    182   ORN_HAEIG Oligoribonuclease OS=Haemophilus in...1874e-35     130     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
30Q87VI6    178   ORN_PSESM Oligoribonuclease OS=Pseudomonas sy...1884e-35     129     39     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
31A5UBG1    182   ORN_HAEIE Oligoribonuclease OS=Haemophilus in...1874e-35     130     38     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
records
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