Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR059C
Length:
269
Number of sequences:
5887
Description:
YLR059C REX2 SGDID:S000004049, Chr XII from 260547-259738, Genome Release 64-1-1, reverse complement, Verified ORF, "3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q1LSQ0    184   ORN_BAUCH Oligoribonuclease OS=Baumannia cica...1819e-28     110     36     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
152Q8PKW8    194   ORN_XANAC Oligoribonuclease OS=Xanthomonas ax...1769e-28     110     39     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
153Q6LM23    181   ORN_PHOPR Oligoribonuclease OS=Photobacterium...1841e-27     110     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
154Q0A8I6    193   ORN_ALHEH Oligoribonuclease OS=Alkalilimnicol...1893e-27     109     36     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
155Q5WT59    187   ORN_LEGPL Oligoribonuclease OS=Legionella pne...1853e-27     108     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
156Q5ZRY0    187   ORN_LEGPH Oligoribonuclease OS=ATCC 33152 / D...1853e-27     108     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
157A5IAI0    187   ORN_LEGPC Oligoribonuclease OS=Legionella pne...1853e-27     108     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
158Q5X1E6    187   ORN_LEGPA Oligoribonuclease OS=Legionella pne...1853e-27     108     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
159Q2NW86    181   ORN_SODGM Oligoribonuclease OS=Sodalis glossi...1864e-27     108     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
160A4XPY0    180   ORN_PSEMY Oligoribonuclease OS=Pseudomonas me...1874e-27     108     35     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
161Q07XW1    181   ORN_SHEFN Oligoribonuclease OS=Shewanella fri...1876e-27     108     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
162A1AVF0    180   ORN_RUTMC Oligoribonuclease OS=Ruthia magnifi...1819e-26     105     35     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
163Q83C93    183   ORN_COXBU Oligoribonuclease OS=Coxiella burne...1762e-25     104     36     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
164Q87E07    193   ORN_XYLFT Oligoribonuclease OS=Xylella fastid...1924e-25     103     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
165Q9PDX2    193   ORN_XYLFA Oligoribonuclease OS=Xylella fastid...1787e-25     102     37     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
166A5EY84    180   ORN_DICNV Oligoribonuclease OS=Dichelobacter ...1823e-24     100     36     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
167P57637    184   ORN_BUCAI Oligoribonuclease OS=(Acyrthosiphon...1761e-23     99.4     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
168Q8K909    184   ORN_BUCAP Oligoribonuclease OS=Buchnera aphid...1811e-23     99     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
169Q7VQP7    180   ORN_BLOFL Oligoribonuclease OS=Blochmannia fl...1771e-20     90.9     32     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
170Q89A34    160   ORN_BUCBP Oligoribonuclease OS=Buchnera aphid...1662e-18     84.3     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
171A5IJJ8    1367   DPO3_THEP1 DNA polymerase III polC-type OS=Th...970.12     37.4     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
172Q9ZHF6    1367   DPO3_THEMA DNA polymerase III polC-type OS=Th...970.52     35.4     29     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
173Q3B8K3    170   RT24B_XENLA 28S ribosomal protein S24-B, mito...1071.7     33.1     27     41GO:0005762; C:mitochondrial large ribosomal subunit; ISS:UniProtKB.
GO:0003735; F:structural constituent of ribosome; ISS:UniProtKB.
GO:0006412; P:translation; ISS:UniProtKB.
174Q6NTS3    170   RT24A_XENLA 28S ribosomal protein S24-A, mito...1071.8     32.7     27     41GO:0005762; C:mitochondrial large ribosomal subunit; ISS:UniProtKB.
GO:0003735; F:structural constituent of ribosome; ISS:UniProtKB.
GO:0006412; P:translation; ISS:UniProtKB.
175Q5WVP6    846   MUTS_LEGPL DNA mismatch repair protein MutS O...832.3     33.5     37     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
176Q5X4B2    846   MUTS_LEGPA DNA mismatch repair protein MutS O...832.4     33.5     37     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
177Q5ZUJ3    846   MUTS_LEGPH DNA mismatch repair protein MutS O...832.5     33.1     37     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
178A5ICW2    846   MUTS_LEGPC DNA mismatch repair protein MutS O...832.5     33.1     37     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
179Q8D882    217   RNT_VIBVU Ribonuclease T OS=Vibrio vulnificus...764.5     32     26     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004540; F:ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
180O69773    384   AMPC_PROST Beta-lactamase OS=Providencia stua...1654.6     32.3     26     45GO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro.
GO:0008800; F:beta-lactamase activity; IEA:EC.
GO:0017001; P:antibiotic catabolic process; IEA:InterPro.::GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
181O67074    202   DPO3E_AQUAE DNA polymerase III subunit epsilo...1667.4     31.2     22     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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