Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR048W
Length:
252
Number of sequences:
5887
Description:
YLR048W RPS0B SGDID:S000004038, Chr XII from 242232-242321,242681-243349, Genome Release 64-1-1, Verified ORF, "Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Ap; required for maturation of 18S rRNA along with Rps0Ap; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46654    252   RSSA2_YEAST 40S ribosomal protein S0-B OS=Sac...2520     514     100     100GO:0030686; C:90S preribosome; IBA:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
GO:0003735; F:structural constituent of ribosome; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000028; P:ribosomal small subunit assembly; IMP:SGD.::GO:0006407; P:rRNA export from nucleus; IGI:SGD.
2A7A0V3    252   RSSA2_YEAS7 40S ribosomal protein S0-B OS=Sac...2520     514     100     100GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
3B3LT19    252   RSSA2_YEAS1 40S ribosomal protein S0-B OS=Sac...2520     514     100     100GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
4P32905    252   RSSA1_YEAST 40S ribosomal protein S0-A OS=Sac...2524e-159     449     95     96GO:0030686; C:90S preribosome; IDA:SGD.::GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
GO:0003735; F:structural constituent of ribosome; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000028; P:ribosomal small subunit assembly; IMP:SGD.::GO:0006407; P:rRNA export from nucleus; IGI:SGD.
5A6ZUM5    252   RSSA1_YEAS7 40S ribosomal protein S0-A OS=Sac...2524e-159     449     95     96GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
6B3LI22    252   RSSA1_YEAS1 40S ribosomal protein S0-A OS=Sac...2524e-159     449     95     96GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
7A7TEU3    252   RSSA1_VANPO 40S ribosomal protein S0-A OS=(Kl...2529e-159     448     88     92GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
8Q6FJX4    251   RSSA_CANGA 40S ribosomal protein S0 OS=NRRL Y...2522e-158     447     93     94GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9C5DX17    252   RSSA_ZYGRC 40S ribosomal protein S0 OS=NCYC 5...2522e-153     434     88     92GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10C5DDM1    251   RSSA_LACTC 40S ribosomal protein S0 OS=(Yeast...2506e-152     431     85     92GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
11Q6CN12    254   RSSA_KLULA 40S ribosomal protein S0 OS=1267 /...2421e-151     430     86     91GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
12A7TIJ7    251   RSSA2_VANPO 40S ribosomal protein S0-B OS=(Kl...2072e-144     412     95     98GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13Q75CQ9    253   RSSA_ASHGO 40S ribosomal protein S0 OS=Y-1056...2502e-141     404     83     91GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.
GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
14A3LRZ0    261   RSSA_PICST 40S ribosomal protein S0 OS=NRRL Y...2493e-139     399     76     86GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
15A5DGG9    261   RSSA_PICGU 40S ribosomal protein S0 OS=1539 /...2491e-134     387     74     86GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16A5DZP6    261   RSSA_LODEL 40S ribosomal protein S0 OS=NBRC 1...2164e-133     383     82     92GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
17Q6BW39    261   RSSA_DEBHA 40S ribosomal protein S0 OS=0083 /...2492e-132     381     74     85GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18C4YNR7    261   RSSA_CANAW 40S ribosomal protein S0 OS=Candid...2142e-131     379     82     93GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
19O42817    261   RSSA_CANAL 40S ribosomal protein S0 OS=Candid...2142e-131     379     82     93GO:0005624; C:membrane fraction; IDA:CGD.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
20B9WEC5    261   RSSA_CANDC 40S ribosomal protein S0 OS=3949 /...2123e-131     379     83     93GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21Q96VK7    261   RSSA_CANTR 40S ribosomal protein S0 OS=Candid...2123e-130     376     82     92GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
22C4Y2C6    263   RSSA_CLAL4 40S ribosomal protein S0 OS=lusita...2208e-130     375     80     90GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23C4QYK0    263   RSSA_PICPG 40S ribosomal protein S0 OS=Pichia...2076e-129     372     83     93GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
24A6RMY2    296   RSSA_BOTFB 40S ribosomal protein S0 OS=cinere...2421e-114     338     68     80GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
25Q6CGM0    270   RSSA_YARLI 40S ribosomal protein S0 OS=lipoly...2062e-114     336     78     87GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
26Q5B8F8    293   RSSA_EMENI 40S ribosomal protein S0 OS=194 / ...2226e-114     335     72     86GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.
GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
27A7F2R3    297   RSSA_SCLS1 40S ribosomal protein S0 OS=mold) ...2421e-113     335     67     79GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
28Q4WYK1    297   RSSA_ASPFU 40S ribosomal protein S0 OS=A1100)...2172e-113     334     72     86GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
29B0XWG9    297   RSSA_ASPFC 40S ribosomal protein S0 OS=(Asper...2172e-113     334     72     86GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
30B6Q3G2    290   RSSA_PENMQ 40S ribosomal protein S0 OS=Penici...2252e-113     334     71     84GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
31Q0CQF6    300   RSSA_ASPTN 40S ribosomal protein S0 OS=Asperg...2173e-113     334     72     86GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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