Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR032W
Length:
1169
Number of sequences:
5887
Description:
YLR032W RAD5 SGDID:S000004022, Chr XII from 204991-208500, Genome Release 64-1-1, Verified ORF, "DNA helicase proposed to promote replication fork regression during postreplication repair by template switching; RING finger containing ubiquitin ligase; stimulates the synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541P0C8K8    552   ARI6_ARATH Putative E3 ubiquitin-protein liga...842.6     35.8     32     45
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
542Q3TL54    445   TR43A_MOUSE Tripartite motif-containing prote...512.7     35.8     35     49GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
543Q6NTT6    353   MUL1_XENLA Mitochondrial ubiquitin ligase act...632.8     35.4     41     48GO:0031307; C:integral to mitochondrial outer membrane; ISS:UniProtKB.::GO:0005777; C:peroxisome; ISS:UniProtKB.
GO:0042802; F:identical protein binding; ISS:UniProtKB.::GO:0004871; F:signal transducer activity; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; ISS:UniProtKB.::GO:0000266; P:mitochondrial fission; ISS:UniProtKB.::GO:0051646; P:mitochondrion localization; ISS:UniProtKB.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.
544B7NF85    421   RHLB_ECOLU ATP-dependent RNA helicase rhlB OS...1502.8     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
545Q5R4I2    486   RNF8_PONAB E3 ubiquitin-protein ligase RNF8 O...552.9     35.4     31     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0030496; C:midbody; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
546Q8LPN7    328   RNG1L_ARATH E3 ubiquitin-protein ligase RING1...982.9     35.4     29     47
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
547B1LLV3    421   RHLB_ECOSM ATP-dependent RNA helicase rhlB OS...1502.9     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
548Q28H21    259   PCGF1_XENTR Polycomb group RING finger protei...882.9     35     28     47GO:0031519; C:PcG protein complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
549Q94CT7    446   XB31_ORYSJ Probable E3 ubiquitin-protein liga...732.9     35.4     33     40
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
550Q9D4H7    753   LONF3_MOUSE LON peptidase N-terminal domain a...592.9     35.8     36     49
GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
551Q31UK5    421   RHLB_SHIBS ATP-dependent RNA helicase rhlB OS...1503     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
552B2TU12    421   RHLB_SHIB3 ATP-dependent RNA helicase rhlB OS...1503     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
553Q329V8    421   RHLB_SHIDS ATP-dependent RNA helicase rhlB OS...1503     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
554Q3YVI4    421   RHLB_SHISS ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
555P0A8K0    421   RHLB_SHIFL ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
556Q1R4F9    421   RHLB_ECOUT ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
557B6I4B6    421   RHLB_ECOSE ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
558P0A8J8    421   RHLB_ECOLI ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IDA:EcoCyc.
559B1IWC0    421   RHLB_ECOLC ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
560P0A8J9    421   RHLB_ECOL6 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
561Q0TAU3    421   RHLB_ECOL5 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
562A1AHV0    421   RHLB_ECOK1 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
563A8A6N4    421   RHLB_ECOHS ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
564B1X9Z4    421   RHLB_ECODH ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
565C4ZZ48    421   RHLB_ECOBW ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
566B7M5C7    421   RHLB_ECO8A ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
567B7MR01    421   RHLB_ECO81 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
568B7NTG2    421   RHLB_ECO7I ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
569B7L8B6    421   RHLB_ECO55 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
570B7MGJ1    421   RHLB_ECO45 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
571B7UMN5    421   RHLB_ECO27 ATP-dependent RNA helicase rhlB OS...1503.1     35.4     21     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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