Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR022C
Length:
250
Number of sequences:
5887
Description:
YLR022C SDO1 SGDID:S000004012, Chr XII from 184926-184174, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential protein involved in 60S ribosome maturation; ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome; highly conserved across archae and eukaryotes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07953    250   SDO1_YEAST Ribosome maturation protein SDO1 O...2500     510     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003723; F:RNA binding; IBA:RefGenome.
GO:0042256; P:mature ribosome assembly; IMP:SGD.
2O14179    246   SDO1_SCHPO Ribosome maturation protein sdo1 O...2463e-65     209     46     66GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0030687; C:preribosome, large subunit precursor; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:RefGenome.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:RefGenome.
3Q6DIT8    250   SBDS_XENTR Ribosome maturation protein SBDS O...2453e-54     181     45     65GO:0005737; C:cytoplasm; ISS:RefGenome.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:RefGenome.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:RefGenome.::GO:0006364; P:rRNA processing; ISS:RefGenome.
4Q5RAZ2    250   SBDS_PONAB Ribosome maturation protein SBDS O...2477e-54     180     43     67GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0019843; F:rRNA binding; ISS:UniProtKB.
GO:0048539; P:bone marrow development; ISS:UniProtKB.::GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; ISS:UniProtKB.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0043148; P:mitotic spindle stabilization; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.
5Q9Y3A5    250   SBDS_HUMAN Ribosome maturation protein SBDS O...2477e-54     180     43     67GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0008017; F:microtubule binding; IDA:UniProtKB.::GO:0043022; F:ribosome binding; IDA:UniProtKB.::GO:0019843; F:rRNA binding; IDA:UniProtKB.
GO:0048539; P:bone marrow development; IMP:UniProtKB.::GO:0030282; P:bone mineralization; IMP:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; IDA:UniProtKB.::GO:0042256; P:mature ribosome assembly; IDA:UniProtKB.::GO:0043148; P:mitotic spindle stabilization; IDA:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; IBA:RefGenome.::GO:0006364; P:rRNA processing; IMP:UniProtKB.
6A5D8M6    250   SBDS_XENLA Ribosome maturation protein SBDS O...2463e-53     179     43     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.
7Q3SWZ6    250   SBDS_BOVIN Ribosome maturation protein SBDS O...2478e-53     177     43     66GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0019843; F:rRNA binding; ISS:UniProtKB.
GO:0048539; P:bone marrow development; ISS:UniProtKB.::GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; ISS:UniProtKB.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0043148; P:mitotic spindle stabilization; ISS:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:RefGenome.::GO:0006364; P:rRNA processing; ISS:UniProtKB.
8Q5RK30    250   SBDS_RAT Ribosome maturation protein SBDS OS=...2462e-52     176     42     64GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IBA:RefGenome.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; IBA:RefGenome.::GO:0006364; P:rRNA processing; IBA:RefGenome.
9P70122    250   SBDS_MOUSE Ribosome maturation protein SBDS O...2464e-52     176     41     64GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; IBA:RefGenome.::GO:0006364; P:rRNA processing; IBA:RefGenome.
10Q5ZIY4    250   SBDS_CHICK Ribosome maturation protein SBDS O...1774e-51     173     49     72GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.::GO:0042273; P:ribosomal large subunit biogenesis; IBA:RefGenome.::GO:0006364; P:rRNA processing; IBA:RefGenome.
11Q23202    253   SBDS_CAEEL Ribosome maturation protein SBDS O...2333e-48     166     42     64GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IBA:RefGenome.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0042273; P:ribosomal large subunit biogenesis; IBA:RefGenome.::GO:0006364; P:rRNA processing; IBA:RefGenome.
12Q86KZ5    274   SBDS_DICDI Ribosome maturation protein SBDS O...2475e-48     166     38     62GO:0005737; C:cytoplasm; IDA:dictyBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030687; C:preribosome, large subunit precursor; ISS:dictyBase.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IBA:RefGenome.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:dictyBase.::GO:0006364; P:rRNA processing; IBA:RefGenome.
13Q9YCU5    233   SDO1_AERPE Ribosome maturation protein SDO1 h...1544e-22     95.9     32     62
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
14O29759    234   SDO1_ARCFU Ribosome maturation protein SDO1 h...2261e-20     91.7     28     50
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
15Q58011    240   SDO1_METJA Ribosome maturation protein SDO1 h...1714e-20     90.1     33     56
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
16Q9V121    236   SDO1_PYRAB Ribosome maturation protein SDO1 h...1752e-16     79     30     58
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
17O59220    236   SDO1_PYRHO Ribosome maturation protein SDO1 h...1750.000000000000005     75.1     29     57
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
18Q8SUL0    223   SDO1_ENCCU Ribosome maturation protein SDO1 O...1130.0000000000003     70.1     39     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
19O26781    232   SDO1_METTH Ribosome maturation protein SDO1 h...1330.00000000005     63.9     27     57
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
20Q002B5    489   DPH2_CRIGR Diphthamide biosynthesis protein 2...1080.14     37     24     43GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0017183; P:peptidyl-diphthamide biosynthetic process from peptidyl-histidine; IEA:InterPro.
21Q9CR25    489   DPH2_MOUSE Diphthamide biosynthesis protein 2...1082.8     32.7     21     42GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0017183; P:peptidyl-diphthamide biosynthetic process from peptidyl-histidine; IEA:InterPro.
22Q9UAR6    818   MYOA_PLAFB Myosin-A OS=Plasmodium falciparum ...593.3     32.7     29     53GO:0016459; C:myosin complex; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
23Q8IDR3    818   MYOA_PLAF7 Myosin-A OS=Plasmodium falciparum ...593.3     32.7     29     53GO:0016459; C:myosin complex; IEA:UniProtKB-KW.::GO:0020039; C:pellicle; IDA:GeneDB_Pfalciparum.::GO:0005886; C:plasma membrane; IDA:GeneDB_Pfalciparum.
GO:0003779; F:actin binding; IDA:GeneDB_Pfalciparum.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
24Q6TS43    1333   CAPSD_CPVBM Capsid protein VP1 OS=Bombyx mori...733.3     32.7     25     48GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
25Q8ED70    689   DNLJ_SHEON DNA ligase OS=Shewanella oneidensi...1895.3     32     21     40GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
26Q9P7K6    106   SDO1L_SCHPO SDO1-like protein C21C3.19 OS=Sch...645.8     30.4     31     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0003723; F:RNA binding; ISS:RefGenome.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:RefGenome.::GO:0006364; P:rRNA processing; ISS:RefGenome.
27Q66HE5    630   NUAK2_RAT NUAK family SNF1-like kinase 2 OS=R...867     31.6     30     47
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.
GO:0030036; P:actin cytoskeleton organization; ISS:UniProtKB.::GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042149; P:cellular response to glucose starvation; IDA:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.
28Q07844    837   RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS...637.2     31.6     29     52GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.
records
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