Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR016C
Length:
204
Number of sequences:
5887
Description:
YLR016C PML1 SGDID:S000004006, Chr XII from 177416-176802, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RES complex, which is required for nuclear retention of unspliced pre-mRNAs; acts in the same pathway as Pml39p and Mlp1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07930    204   PML1_YEAST Pre-mRNA leakage protein 1 OS=Sacc...2043e-150     422     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0070274; C:RES complex; IDA:SGD.
GO:0051237; P:maintenance of RNA location; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:SGD.
2Q5M9G6    389   SNIP1_RAT Smad nuclear interacting protein 1 ...1680.0000000001     63.2     30     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; ISS:UniProtKB.
3Q8BIZ6    383   SNIP1_MOUSE Smad nuclear-interacting protein ...1680.0000000001     63.2     30     42GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; IDA:MGI.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IDA:MGI.
4Q8TAD8    396   SNIP1_HUMAN Smad nuclear-interacting protein ...1680.0000000002     62.4     30     42GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IMP:UniProtKB.
5Q8W4D8    314   DDL_ARATH FHA domain-containing protein DDL O...1680.000000002     59.3     30     42GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IMP:UniProtKB.
GO:0008283; P:cell proliferation; IMP:TAIR.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IDA:TAIR.::GO:0048638; P:regulation of developmental growth; IMP:UniProtKB.
6Q54VU4    1505   Y8013_DICDI Probable serine/threonine-protein...1890.0000004     53.1     26     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
7Q80U49    1574   K0284_MOUSE Protein KIAA0284 OS=Mus musculus ...490.024     38.9     45     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
8Q9Y4F5    1589   K0284_HUMAN Protein KIAA0284 OS=Homo sapiens ...490.082     37.4     41     61GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
9Q06001    478   FAR10_YEAST Factor arrest protein 10 OS=Sacch...520.83     33.9     38     60GO:0005783; C:endoplasmic reticulum; IDA:SGD.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
10Q498L0    1610   K0284_XENLA Protein KIAA0284 homolog OS=Xenop...471.3     33.5     43     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
11A0JM08    1628   K0284_XENTR Protein KIAA0284 homolog OS=Xenop...471.5     33.5     43     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
12Q6GEC4    984   FDHL_STAAR Putative formate dehydrogenase SAR...871.9     33.1     32     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
13O61267    476   LOK_DROME Ovarian-specific serine/threonine-p...861.9     32.7     33     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; NAS:UniProtKB.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IMP:FlyBase.::GO:0071480; P:cellular response to gamma radiation; IMP:BHF-UCL.::GO:0000077; P:DNA damage checkpoint; IDA:FlyBase.::GO:0008630; P:DNA damage response, signal transduction resulting in induction of apoptosis; IMP:BHF-UCL.::GO:0007281; P:germ cell development; IEP:UniProtKB.::GO:0035234; P:germ cell programmed cell death; IMP:FlyBase.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0072332; P:signal transduction by p53 class mediator resulting in induction of apoptosis; IGI:BHF-UCL.
14O54890    787   ITB3_MOUSE Integrin beta-3 OS=Mus musculus (M...692.2     32.7     35     52GO:0034679; C:alpha9-beta1 integrin complex; TAS:BHF-UCL.::GO:0071133; C:alpha9-beta1 integrin-ADAM8 complex; IDA:BHF-UCL.::GO:0009897; C:external side of plasma membrane; IDA:MGI.
GO:0005178; F:integrin binding; IPI:MGI.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0048858; P:cell projection morphogenesis; IC:BHF-UCL.::GO:0007160; P:cell-matrix adhesion; IGI:MGI.::GO:0007044; P:cell-substrate junction assembly; IDA:MGI.::GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0045780; P:positive regulation of bone resorption; IC:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; IMP:BHF-UCL.::GO:0033690; P:positive regulation of osteoblast proliferation; IMP:BHF-UCL.::GO:0045672; P:positive regulation of osteoclast differentiation; IC:BHF-UCL.
15O23305    386   Y4449_ARATH FHA domain-containing protein At4...693     32.3     33     51
16Q931G2    984   FDHL_STAAM Putative formate dehydrogenase SAV...874.4     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
17Q2YYT1    984   FDHL_STAAB Putative formate dehydrogenase SAB...874.4     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
18Q7A057    984   FDHL_STAAW Putative formate dehydrogenase MW2...874.5     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
19Q6G711    984   FDHL_STAAS Putative formate dehydrogenase SAS...874.5     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
20Q99RW4    984   FDHL_STAAN Putative formate dehydrogenase SA2...874.5     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
21Q5HDP9    984   FDHL_STAAC Putative formate dehydrogenase SAC...874.7     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
22Q2FVV9    984   FDHL_STAA8 Putative formate dehydrogenase SAO...874.7     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
23Q2FEI5    984   FDHL_STAA3 Putative formate dehydrogenase SAU...874.7     32     31     43GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:EC.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0016661; F:oxidoreductase activity, acting on other nitrogenous compounds as donors; IEA:InterPro.
GO:0015942; P:formate metabolic process; IEA:InterPro.
24P24719    497   MEK1_YEAST Meiosis-specific serine/threonine-...715     31.6     37     52GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IDA:SGD.
GO:0051598; P:meiotic recombination checkpoint; IMP:SGD.
25Q99KJ5    263   TCF19_MOUSE Transcription factor 19-like prot...455.3     31.2     38     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
26P46017    289   FRAH_NOSS1 Protein fraH OS=Nostoc sp. (strain...375.7     31.2     46     73
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0043158; P:heterocyst differentiation; IEA:UniProtKB-KW.
27P46013    3256   KI67_HUMAN Antigen KI-67 OS=Homo sapiens (Hum...616.5     31.6     36     49GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; TAS:UniProtKB.
28Q6A065    1588   CE170_MOUSE Centrosomal protein of 170 kDa OS...497.3     31.2     43     55GO:0005814; C:centriole; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
29P27680    312   COQ3_YEAST Hexaprenyldihydroxybenzoate methyl...507.5     30.8     34     60GO:0019898; C:extrinsic to membrane; IDA:SGD.::GO:0005743; C:mitochondrial inner membrane; IDA:SGD.
GO:0008425; F:2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity; IEA:InterPro.::GO:0008689; F:3-demethylubiquinone-9 3-O-methyltransferase activity; IEA:EC.::GO:0004395; F:hexaprenyldihydroxybenzoate methyltransferase activity; IMP:SGD.
GO:0006744; P:ubiquinone biosynthetic process; IDA:SGD.
30Q03944    604   VPS64_YEAST Vacuolar protein sorting-associat...618.1     30.8     38     51GO:0005789; C:endoplasmic reticulum membrane; IDA:SGD.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006623; P:protein targeting to vacuole; IMP:SGD.
records
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