Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLR002C
Length:
663
Number of sequences:
5887
Description:
YLR002C NOC3 SGDID:S000003992, Chr XII from 156334-154343, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors to mediate their intranuclear transport; also binds to chromatin to promote the association of DNA replication factors and replication initiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07896    663   NOC3_YEAST Nucleolar complex-associated prote...6630     1357     100     100GO:0030691; C:Noc2p-Noc3p complex; IPI:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006270; P:DNA-dependent DNA replication initiation; IDA:SGD.::GO:0006364; P:rRNA processing; IDA:SGD.
2O94288    747   NOC3_SCHPO Nucleolar complex-associated prote...6158e-83     283     33     56GO:0030691; C:Noc2p-Noc3p complex; ISS:PomBase.
GO:0006270; P:DNA-dependent DNA replication initiation; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.
3Q6DRN3    800   NOC3L_DANRE Nucleolar complex protein 3 homol...6482e-64     233     31     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0007517; P:muscle organ development; IMP:ZFIN.::GO:0019216; P:regulation of lipid metabolic process; IMP:ZFIN.
4Q5R952    800   NOC3L_PONAB Nucleolar complex protein 3 homol...5412e-54     203     31     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
5Q8WTT2    800   NOC3L_HUMAN Nucleolar complex protein 3 homol...5413e-54     203     31     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
6Q8VI84    807   NOC3L_MOUSE Nucleolar complex protein 3 homol...6193e-54     202     29     48GO:0016607; C:nuclear speck; IDA:MGI.::GO:0005730; C:nucleolus; IDA:MGI.
GO:0005488; F:binding; IEA:InterPro.
GO:0045444; P:fat cell differentiation; IMP:MGI.
7Q5XGZ8    795   NOC3L_XENLA Nucleolar complex protein 3 homol...6145e-53     199     31     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
8Q91Y26    800   NOC3L_CRIGR Nucleolar complex protein 3 homol...6176e-53     199     30     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
9Q9VI82    822   NOC3L_DROME Nucleolar complex protein 3 homol...5363e-33     140     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
10P91136    778   NOC3L_CAEEL Nucleolar complex protein 3 homol...5188e-30     129     23     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
11Q61LN7    779   NOC3L_CAEBR Nucleolar complex protein 3 homol...5472e-27     122     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
12Q6NU91    525   NOC4B_XENLA Nucleolar complex protein 4 homol...1390.0005     47     27     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
13Q6NRQ2    526   NOC41_XENLA Nucleolar complex protein 4 homol...1150.0006     46.6     27     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
14Q4VBT2    525   NOC4L_DANRE Nucleolar complex protein 4 homol...1230.0007     46.6     26     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
15Q5ZJC7    508   NOC4L_CHICK Nucleolar complex protein 4 homol...1230.007     43.1     26     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
16Q9BVI4    516   NOC4L_HUMAN Nucleolar complex protein 4 homol...1220.2     38.5     25     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
17Q8U0H4    970   RTCB_PYRFU tRNA-splicing ligase RtcB OS=Pyroc...1250.54     37.4     29     48
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006314; P:intron homing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
18Q88VL5    307   TRUB_LACPL tRNA pseudouridine synthase B OS=L...570.82     36.2     32     58
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
19O14141    241   YEW3_SCHPO Maf-like protein C3G6.03c OS=Schiz...820.97     35.8     33     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
20Q06512    552   NOC4_YEAST Nucleolar complex protein 4 OS=Sac...1520.98     36.2     22     42GO:0030692; C:Noc4p-Nop14p complex; IPI:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
21C6E100    824   SYL_GEOSM Leucine--tRNA ligase OS=Geobacter s...901.1     36.2     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
22B5EE39    824   SYL_GEOBB Leucine--tRNA ligase OS=Geobacter b...901.2     36.2     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
23Q8BHY2    516   NOC4L_MOUSE Nucleolar complex protein 4 homol...1223.4     34.3     24     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
24Q5I0I8    516   NOC4L_RAT Nucleolar complex protein 4 homolog...1224.3     34.3     23     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
25Q75BT5    98   EAF6_ASHGO Chromatin modification-related pro...698     31.2     28     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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