Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL045C
Length:
256
Number of sequences:
5887
Description:
YLL045C RPL8B SGDID:S000003968, Chr XII from 48629-47859, Genome Release 64-1-1, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q6FQV5    126   SNU13_CANGA 13 kDa ribonucleoprotein-associat...560.0007     42     30     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
92Q9CRB2    153   NHP2_MOUSE H/ACA ribonucleoprotein complex su...890.0008     42.4     24     43GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
93P55770    128   NH2L1_RAT NHP2-like protein 1 OS=Rattus norve...560.001     41.6     29     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
94Q9D0T1    128   NH2L1_MOUSE NHP2-like protein 1 OS=Mus muscul...560.001     41.6     29     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
95Q4R5C6    128   NH2L1_MACFA NHP2-like protein 1 OS=Macaca fas...560.001     41.6     29     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
96P55769    128   NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapie...560.001     41.6     29     57GO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
97Q3B8S0    128   NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus...560.001     41.6     29     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
98Q5E950    153   NHP2_BOVIN H/ACA ribonucleoprotein complex su...890.001     42     24     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
99Q6PBV6    150   NHP2_DANRE H/ACA ribonucleoprotein complex su...870.001     42     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
100Q9P7H0    154   NHP2_SCHPO H/ACA ribonucleoprotein complex su...650.001     42     34     52GO:0031429; C:box H/ACA snoRNP complex; IGI:PomBase.
GO:0034513; F:box H/ACA snoRNA binding; IGI:PomBase.::GO:0019843; F:rRNA binding; IC:PomBase.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.::GO:0031120; P:snRNA pseudouridine synthesis; IGI:PomBase.
101Q2NGM2    123   RL7A_METST 50S ribosomal protein L7Ae OS=Meth...530.002     40.4     38     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
102Q9NX24    153   NHP2_HUMAN H/ACA ribonucleoprotein complex su...890.003     40.4     21     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
103Q5RC65    153   NHP2_PONAB H/ACA ribonucleoprotein complex su...890.004     40     21     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
104Q60YI3    163   NHP2_CAEBR Putative H/ACA ribonucleoprotein c...980.023     38.1     21     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
105Q9XXD4    163   NHP2_CAEEL Putative H/ACA ribonucleoprotein c...730.051     37.4     22     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
106P32729    100   YLXQ_BACSU Probable ribosomal protein ylxQ OS...852.5     31.2     29     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
107B6JCI0    363   HRCA_OLICO Heat-inducible transcription repre...1302.9     32.7     31     47
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
108Q92GL1    230   DPO3E_RICCN DNA polymerase III subunit epsilo...553.3     32.3     35     58GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
109Q21568    128   NH2L1_CAEEL NHP2-like protein 1 homolog OS=Ca...568.1     30.4     32     61GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
110A1T3F2    432   GSA_MYCVP Glutamate-1-semialdehyde 2,1-aminom...718.7     31.2     31     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0042286; F:glutamate-1-semialdehyde 2,1-aminomutase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.::GO:0008483; F:transaminase activity; IEA:InterPro.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
records
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