Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL040C
Length:
3144
Number of sequences:
5887
Description:
YLL040C VPS13 SGDID:S000003963, Chr XII from 63645-54211, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function; heterooligomeric or homooligomeric complex; peripherally associated with membranes; homologous to human COH1; involved in sporulation, vacuolar protein sorting and protein-Golgi retention"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07878    3144   VPS13_YEAST Vacuolar protein sorting-associat...31440     6473     100     100GO:0019898; C:extrinsic to membrane; IDA:SGD.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005773; C:vacuole; IMP:GOC.
GO:0030437; P:ascospore formation; IMP:SGD.::GO:0045324; P:late endosome to vacuole transport; IMP:SGD.::GO:0045053; P:protein retention in Golgi apparatus; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007039; P:vacuolar protein catabolic process; IMP:SGD.
2P87319    3011   VP13A_SCHPO Vacuolar protein sorting-associat...31580     984     26     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005768; C:endosome; ISS:PomBase.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0045324; P:late endosome to vacuole transport; ISS:PomBase.::GO:0045053; P:protein retention in Golgi apparatus; ISS:PomBase.
3O42926    3131   VP13B_SCHPO Vacuolar protein sorting-associat...31590     887     26     47GO:0005768; C:endosome; ISS:PomBase.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0045324; P:late endosome to vacuole transport; ISS:PomBase.::GO:0045053; P:protein retention in Golgi apparatus; ISS:PomBase.
4Q54LB8    3373   VP13A_DICDI Putative vacuolar protein sorting...1481.5     38.5     24     48GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5Q96RL7    3174   VP13A_HUMAN Vacuolar protein sorting-associat...7760.0000000008     69.3     22     39GO:0005622; C:intracellular; NAS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006895; P:Golgi to endosome transport; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6Q8BX70    3748   VP13C_MOUSE Vacuolar protein sorting-associat...19131e-21     107     19     39
GO:0008104; P:protein localization; IEA:InterPro.
7Q709C8    3753   VP13C_HUMAN Vacuolar protein sorting-associat...18322e-21     107     19     40
GO:0008104; P:protein localization; IEA:InterPro.
8Q5H8C4    3166   VP13A_MOUSE Vacuolar protein sorting-associat...6800.0000002     61.6     21     39
GO:0007626; P:locomotory behavior; IMP:MGI.::GO:0007399; P:nervous system development; IMP:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0035176; P:social behavior; IMP:MGI.
9Q55EI3    4241   VP13E_DICDI Putative vacuolar protein sorting...2400.00000000002     73.9     23     45GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
10Q555C6    6061   VP13B_DICDI Putative vacuolar protein sorting...511.2     38.9     41     63GO:0005615; C:extracellular space; IDA:dictyBase.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
11Q55FG3    3848   VP13C_DICDI Putative vacuolar protein sorting...6982e-53     213     27     45GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0045324; P:late endosome to vacuole transport; ISS:dictyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
12Q5THJ4    4387   VP13D_HUMAN Vacuolar protein sorting-associat...6560.00000000002     74.3     22     40
GO:0008104; P:protein localization; IEA:InterPro.
13Q9BGZ0    619   VP13A_MACFA Vacuolar protein sorting-associat...4995e-45     180     28     46
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
14Q54KX3    4246   VP13F_DICDI Putative vacuolar protein sorting...553.3     37.4     33     62GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
15Q54LN2    4592   VP13D_DICDI Putative vacuolar protein sorting...1930.000002     57.8     27     48GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
16Q7Z7G8    4022   VP13B_HUMAN Vacuolar protein sorting-associat...1020.00000006     62.8     37     56
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
17Q80TY5    4013   VP13B_MOUSE Vacuolar protein sorting-associat...1020.00000005     63.2     37     56
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
18Q96BY7    2078   ATG2B_HUMAN Autophagy-related protein 2 homol...2250.000008     55.8     24     44
19Q80XK6    2075   ATG2B_MOUSE Autophagy-related protein 2 homol...2250.00003     53.9     24     44
20Q86K84    653   VP13L_DICDI Vacuolar protein sorting-associat...990.1     42     32     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
21Q54PG5    399   GACC_DICDI Rho GTPase-activating protein gacC...640.0002     50.1     39     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0007165; P:signal transduction; IEA:InterPro.
22Q08D51    1997   ATG2A_XENTR Autophagy-related protein 2 homol...890.007     46.2     27     53
23Q4PFE7    2081   ATG2_USTMA Autophagy-related protein 2 OS=Ust...940.007     46.2     29     53GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
24A2RSJ4    1457   UH1BL_MOUSE UHRF1-binding protein 1-like OS=M...780.29     40.8     28     56
25O08734    208   BAK_MOUSE Bcl-2 homologous antagonist/killer ...961.9     37     29     52GO:0031307; C:integral to mitochondrial outer membrane; IDA:BHF-UCL.::GO:0046930; C:pore complex; ISS:HGNC.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0034644; P:cellular response to UV; IMP:UniProtKB.::GO:0010248; P:establishment or maintenance of transmembrane electrochemical gradient; ISS:HGNC.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.::GO:0046902; P:regulation of mitochondrial membrane permeability; ISS:HGNC.::GO:0051881; P:regulation of mitochondrial membrane potential; ISS:HGNC.::GO:0001836; P:release of cytochrome c from mitochondria; IMP:BHF-UCL.
26Q9V3S9    666   BGM_DROME Very long-chain-fatty-acid--CoA lig...863.3     37     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004467; F:long-chain fatty acid-CoA ligase activity; IMP:UniProtKB.
GO:0001676; P:long-chain fatty acid metabolic process; IMP:UniProtKB.
records
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