Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL039C
Length:
381
Number of sequences:
5887
Description:
YLL039C UBI4 SGDID:S000003962, Chr XII from 65207-64062, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P0CG63    381   UBI4P_YEAST Polyubiquitin OS=Saccharomyces ce...3810     749     100     100GO:0005737; C:cytoplasm; IC:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043008; F:ATP-dependent protein binding; TAS:SGD.
GO:0030437; P:ascospore formation; TAS:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; TAS:SGD.::GO:0006513; P:protein monoubiquitination; TAS:SGD.::GO:0000209; P:protein polyubiquitination; TAS:SGD.
2P0CG75    381   UBI4P_KLULA Polyubiquitin OS=1267 / NRRL Y-11...3050     599     99     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
3P0CG72    382   UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomy...3050     599     99     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0031386; F:protein tag; NAS:PomBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IMP:PomBase.::GO:0016579; P:protein deubiquitination; NAS:PomBase.::GO:0016567; P:protein ubiquitination; NAS:PomBase.
4P0CH32    382   UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis tha...3810     740     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
5P69322    381   UBIQP_PEA Polyubiquitin OS=Pisum sativum (Gar...3800     739     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
6P0CH05    458   UBI2P_PETCR Polyubiquitin OS=Petroselinum cri...3800     740     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
7P0CH04    458   UBI1P_PETCR Polyubiquitin OS=Petroselinum cri...3800     740     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
8Q58G87    381   UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa su...3050     593     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
9Q8H159    457   UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis t...3800     739     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
10P0CG85    457   UBI1P_NICSY Polyubiquitin OS=Nicotiana sylves...3800     739     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
11P0CG84    377   UBI4P_NICSY Polyubiquitin OS=Nicotiana sylves...3050     592     97     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
12P42740    457   UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion ne...3050     588     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
13P59669    457   UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium ...3800     731     96     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
14P42739    423   UBIQP_ACECL Polyubiquitin OS=Acetabularia cli...3450     665     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
15P0CG82    381   UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyri...3800     724     95     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
16P0CG81    381   UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium ...3810     719     95     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
17P0CG68    533   UBC_PIG Polyubiquitin-C OS=Sus scrofa (Pig). ...3800     722     96     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
18P0CG76    381   UBIQA_DICDI Polyubiquitin-A OS=Dictyostelium ...3810     717     95     97GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
19P0CG66    609   UBC_GORGO Polyubiquitin-C OS=Gorilla gorilla ...3050     582     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
20P0CG79    381   UBIQG_DICDI Polyubiquitin-G OS=Dictyostelium ...3050     575     94     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
21P62976    658   UBIQP_CRIGR Polyubiquitin OS=Cricetulus grise...3360     620     94     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
22P0CG71    838   UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis...3800     730     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
23P0CG48    685   UBC_HUMAN Polyubiquitin-C OS=Homo sapiens (Hu...3050     582     96     99GO:0005829; C:cytosol; TAS:Reactome.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000187; P:activation of MAPK activity; TAS:Reactome.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0006916; P:anti-apoptosis; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0006281; P:DNA repair; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0007254; P:JNK cascade; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007220; P:Notch receptor processing; TAS:Reactome.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0070423; P:nucleotide-binding oligomerization domain containing signaling pathway; TAS:Reactome.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome.::GO:0008063; P:Toll signaling pathway; TAS:Reactome.::GO:0034130; P:toll-like receptor 1 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0034138; P:toll-like receptor 3 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.::GO:0035666; P:TRIF-dependent toll-like receptor signaling pathway; TAS:Reactome.
24P0CG78    533   UBIQF_DICDI Polyubiquitin-F OS=Dictyostelium ...3800     716     95     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
25P0CH28    690   UBC_BOVIN Polyubiquitin-C OS=Bos taurus (Bovi...3050     581     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
26P0CG50    734   UBC_MOUSE Polyubiquitin-C OS=Mus musculus (Mo...3310     617     95     97GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
27P0CG69    763   UBIQP_DROME Polyubiquitin OS=Drosophila melan...3060     583     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.
28P0CG61    761   UBC_PONPY Polyubiquitin-C OS=Pongo pygmaeus (...3050     582     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
29P0CG64    761   UBC_PANTR Polyubiquitin-C OS=Pan troglodytes ...3050     582     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
30Q63429    810   UBC_RAT Polyubiquitin-C OS=Rattus norvegicus ...3310     617     95     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:RGD.
31P0CG74    305   UBI4P_CANAX Polyubiquitin OS=Candida albicans...3040     598     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 294 1 - 30
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::