Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL039C
Length:
381
Number of sequences:
5887
Description:
YLL039C UBI4 SGDID:S000003962, Chr XII from 65207-64062, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P62972    167   UBIQP_XENLA Polyubiquitin OS=Xenopus laevis (...1526e-97     293     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
62P23398    133   UBIQP_STRPU Polyubiquitin OS=Strongylocentrot...763e-41     147     95     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
63P0C073    153   RUB1_DESAN Ubiquitin-NEDD8-like protein RUB1 ...1526e-79     246     80     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
64Q9SHE7    156   RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1 ...1522e-78     245     80     89GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0009790; P:embryo development; IGI:TAIR.::GO:0009693; P:ethylene biosynthetic process; IMP:TAIR.::GO:0045116; P:protein neddylation; TAS:TAIR.::GO:0009733; P:response to auxin stimulus; TAS:TAIR.
65P0C030    153   RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 ...1521e-78     245     80     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
66P0C031    153   RUB2_ORYSJ Ubiquitin-NEDD8-like protein RUB2 ...1521e-78     245     80     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
67Q8RUC6    154   RUB2_ARATH Ubiquitin-NEDD8-like protein RUB2 ...1529e-78     243     79     88GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
68P0C032    154   RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like ...1524e-75     236     74     88GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
69P40909    129   RL40_CRYNJ Ubiquitin-60S ribosomal protein L4...761e-44     156     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
70P0CH07    128   RL402_SCHPO Ubiquitin-60S ribosomal protein L...761e-44     156     100     100GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
71P0CH06    128   RL401_SCHPO Ubiquitin-60S ribosomal protein L...761e-44     156     100     100GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
72P0CH09    128   RL402_YEAST Ubiquitin-60S ribosomal protein L...762e-44     155     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
73P0CH08    128   RL401_YEAST Ubiquitin-60S ribosomal protein L...762e-44     155     100     100GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0042254; P:ribosome biogenesis; IDA:SGD.
74P51423    128   RL40_BRARA Ubiquitin-60S ribosomal protein L4...765e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
75P49636    128   RL40_NICSY Ubiquitin-60S ribosomal protein L4...767e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
76P0CH35    129   RL40B_ORYSJ Ubiquitin-60S ribosomal protein L...768e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
77P0CH34    129   RL40A_ORYSJ Ubiquitin-60S ribosomal protein L...768e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
78Q42202    128   RL40B_ARATH Ubiquitin-60S ribosomal protein L...768e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
79B9DHA6    128   RL40A_ARATH Ubiquitin-60S ribosomal protein L...768e-44     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
80P0C224    128   RL40_NEUCR Ubiquitin-60S ribosomal protein L4...761e-43     154     99     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
81P19848    76   UBIQ_COPCO Ubiquitin OS=Coprinus congregatus ...767e-44     152     99     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
82P69317    77   UBIQ_LUPPO Ubiquitin OS=Lupinus polyphyllus (...762e-43     151     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
83P69313    77   UBIQ_HELAN Ubiquitin OS=Helianthus annuus (Co...762e-43     151     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
84P69310    76   UBIQ_AVESA Ubiquitin OS=Avena sativa (Oat). G...761e-43     151     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
85P69326    77   UBIQ_WHEAT Ubiquitin OS=Triticum aestivum (Wh...761e-43     151     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
86P0CH10    128   RL403_CHLRE Ubiquitin-60S ribosomal protein L...762e-43     152     96     100
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
87P0CH11    128   RL401_CHLRE Ubiquitin-60S ribosomal protein L...762e-43     152     96     100
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
88P49632    128   RL40_CAEEL Ubiquitin-60S ribosomal protein L4...762e-43     152     96     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
89P14795    128   RL40_TRYCR Ubiquitin-60S ribosomal protein L4...763e-43     152     95     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
90Q9ARZ9    155   R27AA_ORYSJ Ubiquitin-40S ribosomal protein S...762e-43     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
91P0CG86    155   RS271_HORVU Ubiquitin-40S ribosomal protein S...762e-43     154     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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