Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL039C
Length:
381
Number of sequences:
5887
Description:
YLL039C UBI4 SGDID:S000003962, Chr XII from 65207-64062, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q96PU4    802   UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2...740.00007     48.5     38     61GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEP:HGNC.::GO:0008283; P:cell proliferation; IEP:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:HGNC.
212Q5EAE3    234   UBTD2_BOVIN Ubiquitin domain-containing prote...700.00008     47.4     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
213Q9NIF3    523   UBQL_DICDI Ubiquilin OS=Dictyostelium discoid...680.00008     48.1     40     60GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
214Q8VDF2    782   UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1...740.0001     48.1     39     62GO:0000792; C:heterochromatin; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; TAS:MGI.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
215Q7TPK1    774   UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 O...740.0001     47.8     39     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
216Q640W6    234   UBTD1_XENLA Ubiquitin domain-containing prote...710.0001     46.6     31     58
217Q68FV8    227   UBTD1_RAT Ubiquitin domain-containing protein...670.0001     46.2     34     55
218Q91WB7    227   UBTD1_MOUSE Ubiquitin domain-containing prote...670.0002     46.2     34     55
219Q8LRK9    1919   TAF1A_ARATH Transcription initiation factor T...920.006     42.7     27     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
220Q9Z1R2    1154   BAG6_MOUSE Large proline-rich protein BAG6 OS...720.0002     47.4     35     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0030544; F:Hsp70 protein binding; IPI:UniProtKB.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0070628; F:proteasome binding; IDA:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:UniProtKB.::GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; IMP:UniProtKB.::GO:0007420; P:brain development; IMP:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; IMP:UniProtKB.::GO:0030324; P:lung development; IMP:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0050821; P:protein stabilization; IMP:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; IMP:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
221A2VDN6    793   SF3A1_BOVIN Splicing factor 3A subunit 1 OS=B...690.0002     47     30     58GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
222Q9HAC8    227   UBTD1_HUMAN Ubiquitin domain-containing prote...670.0002     45.8     34     55
223Q15459    793   SF3A1_HUMAN Splicing factor 3A subunit 1 OS=H...690.0002     47     30     58GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005684; C:U2-type spliceosomal complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0000389; P:nuclear mRNA 3'-splice site recognition; TAS:HGNC.
224Q54TK0    96   NED81_DICDI NEDD8-like protein 1 OS=Dictyoste...530.0002     43.9     40     60
225Q3ZBQ1    227   UBTD1_BOVIN Ubiquitin domain-containing prote...670.0002     45.8     34     55
226Q40742    392   RAD23_ORYSJ Probable DNA repair protein RAD23...750.0002     46.6     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
227Q6PGH0    234   UBTD2_MOUSE Ubiquitin domain-containing prote...700.0002     45.8     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
228Q8WUN7    234   UBTD2_HUMAN Ubiquitin domain-containing prote...710.0003     45.4     30     56GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
229Q8K4Z5    791   SF3A1_MOUSE Splicing factor 3A subunit 1 OS=M...690.0003     46.2     30     58GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
230Q6MG49    1146   BAG6_RAT Large proline-rich protein BAG6 OS=R...720.0004     46.2     36     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0042127; P:regulation of cell proliferation; IEP:RGD.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
231Q54LV1    342   RAD23_DICDI UV excision repair protein RAD23 ...610.0004     45.4     38     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
232Q7TMI3    803   UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2...740.0007     45.4     36     61GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; ISS:HGNC.::GO:0008283; P:cell proliferation; ISS:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:HGNC.
233Q4V8W7    227   UBTD1_DANRE Ubiquitin domain-containing prote...710.001     43.9     37     55
234Q6DG43    240   UBTD2_DANRE Ubiquitin domain-containing prote...710.001     43.9     27     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
235P46379    1132   BAG6_HUMAN Large proline-rich protein BAG6 OS...720.001     44.7     35     57GO:0071818; C:BAT3 complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; IDA:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; IMP:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; IDA:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
236A5D9M6    1128   BAG6_PIG Large proline-rich protein BAG6 OS=S...720.001     44.7     35     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
237P48510    373   DSK2_YEAST Ubiquitin domain-containing protei...560.002     43.5     39     57GO:0005635; C:nuclear envelope; IGI:GOC.
GO:0030674; F:protein binding, bridging; IMP:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD.
238P54727    409   RD23B_HUMAN UV excision repair protein RAD23 ...640.003     42.7     36     61GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; IDA:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc.
GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
239Q4KMA2    415   RD23B_RAT UV excision repair protein RAD23 ho...640.004     42.7     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
240P54728    416   RD23B_MOUSE UV excision repair protein RAD23 ...640.004     42.7     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
241Q10169    354   DSK2_SCHPO Deubiquitination-protection protei...550.032     39.7     40     60GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0031593; F:polyubiquitin binding; IDA:PomBase.
GO:0033554; P:cellular response to stress; NAS:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0030474; P:spindle pole body duplication; ISS:PomBase.
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