Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL034C
Length:
837
Number of sequences:
5887
Description:
YLL034C RIX7 SGDID:S000003957, Chr XII from 73146-70633, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative ATPase of the AAA family, required for export of pre-ribosomal large subunits from the nucleus; distributed between the nucleolus, nucleoplasm, and nuclear periphery depending on growth conditions"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q2W2A5    347   RUVB_MAGSA Holliday junction ATP-dependent DN...322.1     35.4     50     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
782Q54DY9    458   BCS1B_DICDI Probable mitochondrial chaperone ...310.002     45.1     61     74GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:dictyBase.
GO:0051131; P:chaperone-mediated protein complex assembly; ISS:dictyBase.
783A0LUK5    367   RUVB_ACIC1 Holliday junction ATP-dependent DN...697.7     33.5     35     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
784A4WBL8    336   RUVB_ENT38 Holliday junction ATP-dependent DN...710.058     40.4     37     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
785C6DFF2    336   RUVB_PECCP Holliday junction ATP-dependent DN...710.056     40.4     37     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
786Q6GBW3    818   CLPC_STAAS ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
787Q6GJE4    818   CLPC_STAAR ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
788Q7A797    818   CLPC_STAAN ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
789Q99W78    818   CLPC_STAAM ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
790P0C281    818   CLPC_STAAC ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
791Q2G0P5    818   CLPC_STAA8 ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0019538; P:protein metabolic process; IEA:InterPro.
792Q2FJB5    818   CLPC_STAA3 ATP-dependent Clp protease ATP-bin...4840.00003     51.2     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
793C5D5E8    333   RUVB_GEOSW Holliday junction ATP-dependent DN...340.032     41.2     50     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
794Q5GT33    326   RUVB_WOLTR Holliday junction ATP-dependent DN...1640.001     45.4     33     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
795Q8RE97    332   RUVB_FUSNN Holliday junction ATP-dependent DN...340.003     44.3     56     68
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
796Q04YY5    341   RUVB_LEPBL Holliday junction ATP-dependent DN...1738.5     33.5     25     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
797A6H5M5    2434   YCF2_CYCTA Protein ycf2 OS=Cycas taitungensis...1730.023     42.4     21     39GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
798B0C2D5    375   RUVB_ACAM1 Holliday junction ATP-dependent DN...2150.00004     50.4     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
799B5FCQ2    337   RUVB_VIBFM Holliday junction ATP-dependent DN...710.044     40.4     35     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
800B3WC56    338   RUVB_LACCB Holliday junction ATP-dependent DN...640.016     42     38     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
801Q03B17    338   RUVB_LACC3 Holliday junction ATP-dependent DN...640.016     42     38     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
802Q5FQC4    349   RUVB_GLUOX Holliday junction ATP-dependent DN...320.22     38.5     56     63
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
803A4IRB2    333   RUVB_GEOTN Holliday junction ATP-dependent DN...340.059     40     53     62
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
804C3NHF4    405   RFCL_SULIN Replication factor C large subunit...780.11     39.7     33     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
805C3MVD2    405   RFCL_SULIM Replication factor C large subunit...810.38     37.7     33     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
806C3N5N1    405   RFCL_SULIA Replication factor C large subunit...810.38     37.7     33     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
807Q2YSD6    818   CLPC_STAAB ATP-dependent Clp protease ATP-bin...4840.00006     50.4     23     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
808C4KHA7    405   RFCL_SULIK Replication factor C large subunit...810.38     37.7     33     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
809Q85WV5    2062   YCF2_PINKO Protein ycf2 OS=Pinus koraiensis (...1650.001     46.2     25     40GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
810Q5HAK4    331   RUVB_EHRRW Holliday junction ATP-dependent DN...1600.001     45.4     31     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
811Q5FG39    331   RUVB_EHRRG Holliday junction ATP-dependent DN...1600.001     45.4     31     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
records
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