Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...3136.4     33.1     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
962Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...851     35.8     25     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
963B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...1120.16     38.1     26     44
964Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...871     35.8     28     47GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
965Q4PHV3    587   IPI3_USTMA Pre-rRNA-processing protein IPI3 O...2122.2     34.7     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
966C7J8E5    1218   RTOR2_ORYSJ Regulatory-associated protein of ...2200.17     38.5     22     44
GO:0005488; F:binding; IEA:InterPro.
967B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1461.8     34.7     20     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
968O13985    512   YEG3_SCHPO Uncharacterized WD repeat-containi...1690.17     38.1     25     44GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IMP:PomBase.
969Q6GM65    799   PLAP_XENLA Phospholipase A-2-activating prote...862.9     34.3     33     44
GO:0005488; F:binding; IEA:InterPro.
970Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...790.18     38.1     32     46
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
971Q9Y263    795   PLAP_HUMAN Phospholipase A-2-activating prote...860.74     36.2     29     43
GO:0016005; F:phospholipase A2 activator activity; TAS:ProtInc.
GO:0006644; P:phospholipid metabolic process; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
972Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...1500.18     37.7     20     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
973Q6PJI9    974   WDR59_HUMAN WD repeat-containing protein 59 O...1086.3     33.1     21     44
974Q552R1    325   DCAF7_DICDI DDB1- and CUL4-associated factor ...2280.19     37.7     25     41
975B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...796     33.1     22     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
976Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...996.5     33.1     23     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
977Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...790.19     37.7     30     46
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
978Q803V5    326   LST8_DANRE Target of rapamycin complex subuni...3240.49     36.2     21     40GO:0005737; C:cytoplasm; ISS:UniProtKB.
979P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...1701.5     35     22     42GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
980Q75AV6    1361   RTC1_ASHGO Restriction of telomere capping pr...1681.7     35     24     41GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
981Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...1690.2     38.1     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
982P53196    417   RPN14_YEAST 26S proteasome regulatory subunit...850.2     37.7     26     48GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
983A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...750.21     37.7     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
984Q7KWK5    514   PRP19_DICDI Pre-mRNA-processing factor 19 hom...1741.2     35.4     23     44GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:dictyBase.::GO:0000151; C:ubiquitin ligase complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
985Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1053.2     34.3     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
986A4IGH4    413   WDR4_DANRE tRNA (guanine-N(7)-)-methyltransfe...1340.23     37.4     22     46GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
987O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...1390.72     36.2     22     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
988Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...2470.24     37.4     21     37GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
989P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...2731.7     34.7     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
990P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...1230.25     37.4     24     47GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
991B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...2351.5     35     23     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 961 - 990
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::