Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q80ZD0    353   GBB5_TAMST Guanine nucleotide-binding protein...2060.078     38.9     23     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
92O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...2060.079     38.9     23     42GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
93Q6PNB6    353   GBB5_RABIT Guanine nucleotide-binding protein...2060.17     37.7     22     42GO:0005634; C:nucleus; ISS:AgBase.::GO:0005886; C:plasma membrane; ISS:AgBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; ISS:AgBase.
94Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...2190.95     35.8     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
95B6GZD3    464   LIS12_PENCW Nuclear distribution protein nudF...1770.011     42     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
96A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...3500.00000004     59.3     21     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
97Q5JTN6    314   WDR38_HUMAN WD repeat-containing protein 38 O...820.13     38.1     32     44
98B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...863.8     33.9     27     50
99Q7SYD5    1254   SC31A_DANRE Protein transport protein Sec31A ...2200.00000004     59.7     24     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
100Q13610    501   PWP1_HUMAN Periodic tryptophan protein 1 homo...2190.29     37.4     22     40GO:0005634; C:nucleus; TAS:ProtInc.
GO:0006351; P:transcription, DNA-dependent; TAS:ProtInc.
101O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...2770.000008     52     21     42GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
102P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...840.11     38.9     25     45GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
103Q0D0X6    446   LIS1_ASPTN Nuclear distribution protein nudF ...3230.00000005     58.5     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
104P90916    417   LIN53_CAEEL Probable histone-binding protein ...2180.39     37     20     39GO:0070176; C:DRM complex; IDA:UniProtKB.
GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
105P78706    604   RCO1_NEUCR Transcriptional repressor rco-1 OS...960.86     35.8     29     43
GO:0048315; P:conidium formation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
106Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...2400.28     37.7     23     38GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
107Q1LZ08    668   WDR48_DROME WD repeat-containing protein 48 h...864.9     33.5     27     50
108Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...3130.0005     46.2     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
109Q5RD06    451   POC1B_PONAB POC1 centriolar protein homolog B...750.002     44.3     31     49GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
110B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...861.7     35     27     50
111B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...861.6     35     27     50
112A8X8C6    368   TG125_CAEBR WD repeat-containing protein tag-...2500.00001     50.8     22     44
113Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...2400.29     37.4     23     38GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
114Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...2050.024     40.8     23     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
115Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...2700.0000001     57.8     25     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
116Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...1850.3     37.4     20     42
117B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...1850.3     37.4     20     42
118Q09855    506   POF11_SCHPO F-box/WD repeat-containing protei...3120.00008     48.9     20     37GO:0005829; C:cytosol; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
119Q3MHE2    521   PRP4_BOVIN U4/U6 small nuclear ribonucleoprot...2280.000007     52     21     38GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
120Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...2280.000008     52     21     38GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
121Q8H0T9    837   KTNB1_ARATH Katanin p80 WD40 repeat-containin...1360.45     37     21     37GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:TAIR.
records
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