Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...2650.011     42.4     23     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
782Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...2362.5     34.3     23     39GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
783Q4P5F5    455   CIAO1_USTMA Probable cytosolic iron-sulfur pr...820.012     41.6     29     48
784Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...1800.012     42     22     42
785Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...1640.012     41.6     18     43GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
786Q04724    770   TLE1_HUMAN Transducin-like enhancer protein 1...1690.012     42     23     44
GO:0001106; F:RNA polymerase II transcription corepressor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; IDA:UniProtKB.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; NAS:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
787Q3UDP0    460   WDR41_MOUSE WD repeat-containing protein 41 O...3860.012     41.6     20     38
788Q9P783    480   RRB1_SCHPO Ribosome assembly protein rrb1 OS=...1320.013     41.6     27     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
789Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...1977.8     32.3     26     40
790P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...1750.97     35.8     25     44GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
791Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...2890.014     41.6     19     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
792Q9HAD4    459   WDR41_HUMAN WD repeat-containing protein 41 O...3860.014     41.6     21     39
793O13982    399   YEC8_SCHPO Uncharacterized WD repeat-containi...901.1     35.4     27     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
794P57081    412   WDR4_HUMAN tRNA (guanine-N(7)-)-methyltransfe...1620.014     41.6     27     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006400; P:tRNA modification; IDA:UniProtKB.
795P87060    775   POP1_SCHPO WD repeat-containing protein pop1 ...860.33     37.4     26     45GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
796Q6NQ88    557   DDB2_ARATH Protein DAMAGED DNA-BINDING 2 OS=A...1270.015     41.6     30     48GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IMP:TAIR.::GO:0010224; P:response to UV-B; IEP:TAIR.
797Q96S15    920   WDR24_HUMAN WD repeat-containing protein 24 O...1460.3     37.4     25     46
798Q9BQA1    342   MEP50_HUMAN Methylosome protein 50 OS=Homo sa...2360.029     40.4     22     36GO:0005829; C:cytosol; TAS:Reactome.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IGI:MGI.
GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IGI:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.
799Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...1947.9     32.3     21     43GO:0005737; C:cytoplasm; ISS:UniProtKB.
800P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...3690.024     40.8     20     33GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
801P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...3690.024     40.8     20     33GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
802Q6CG48    437   LIS1_YARLI Nuclear distribution protein PAC1 ...1001.5     35     21     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
803Q4P2B6    1416   SEC31_USTMA Protein transport protein SEC31 O...1780.018     41.6     24     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
804B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...1510.018     40.8     21     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
805Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...1948.6     32.3     21     43GO:0005737; C:cytoplasm; ISS:UniProtKB.
806Q9Y297    605   FBW1A_HUMAN F-box/WD repeat-containing protei...1450.22     37.7     25     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0043433; P:negative regulation of sequence-specific DNA binding transcription factor activity; TAS:BHF-UCL.::GO:0045879; P:negative regulation of smoothened signaling pathway; TAS:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; IMP:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0031648; P:protein destabilization; IMP:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
807P62884    312   GBLP_LEIIN Guanine nucleotide-binding protein...3010.069     38.9     22     38
808P62883    312   GBLP_LEICH Guanine nucleotide-binding protein...3010.069     38.9     22     38
809Q5R1S9    566   CAF1B_CHICK Chromatin assembly factor 1 subun...1240.02     41.2     25     45GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
810Q5XGE2    515   UTP15_XENTR U3 small nucleolar RNA-associated...2380.023     40.8     17     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
811Q498F0    912   WDR44_XENLA WD repeat-containing protein 44 O...2000.64     36.6     24     46GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
records
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