Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...760.25     37.7     26     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
662O43379    1518   WDR62_HUMAN WD repeat-containing protein 62 O...2560.003     44.3     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0021987; P:cerebral cortex development; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.
663B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...2690.003     43.5     22     38GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
664Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...3370.003     43.9     24     40GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
665Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...1480.005     42.7     24     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
666B5X3C4    410   LIS1B_SALSA Lissencephaly-1 homolog B OS=Salm...2650.17     38.1     19     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
667O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...3360.003     43.5     21     37GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
668Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...2790.003     43.9     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
669O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...1661.3     35.4     23     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
670Q9UM11    496   FZR_HUMAN Fizzy-related protein homolog OS=Ho...1570.003     43.5     22     46GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IDA:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0045732; P:positive regulation of protein catabolic process; IGI:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0070979; P:protein K11-linked ubiquitination; TAS:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.
671Q9DB94    358   WDR53_MOUSE WD repeat-containing protein 53 O...2110.003     43.5     22     40
672A5E2R6    415   CIAO1_LODEL Probable cytosolic iron-sulfur pr...1430.047     39.7     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
673D4D8P3    663   SCONB_TRIVH Probable E3 ubiquitin ligase comp...830.23     37.7     29     53
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
674Q3TLR7    729   DTL_MOUSE Denticleless protein homolog OS=Mus...3440.003     43.9     21     38GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
675Q26544    301   WSL17_SCHMA WD repeat-containing protein SL1-...3350.003     43.1     22     40
676Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...2570.003     43.5     21     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
677Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...520.55     36.2     31     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
678Q9D0N7    572   CAF1B_MOUSE Chromatin assembly factor 1 subun...1130.59     36.6     26     40GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
679B4N984    504   WDR55_DROWI WD repeat-containing protein 55 h...1100.004     43.5     27     47
680Q54FW9    508   Y0555_DICDI WD repeat-containing protein DDB_...1900.004     43.5     24     41GO:0005615; C:extracellular space; IDA:dictyBase.
681Q6C7Q4    452   HAT2_YARLI Histone acetyltransferase type B s...1140.009     42     22     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
682Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...520.56     36.2     31     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
683B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...1410.004     43.5     26     45
684Q5TAQ9    597   DCAF8_HUMAN DDB1- and CUL4-associated factor ...1740.004     43.5     22     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
685O55029    905   COPB2_MOUSE Coatomer subunit beta' OS=Mus mus...2010.1     38.9     21     38
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
686Q13112    559   CAF1B_HUMAN Chromatin assembly factor 1 subun...1182     34.7     25     38GO:0033186; C:CAF-1 complex; IDA:UniProtKB.::GO:0005813; C:centrosome; IDA:HPA.
GO:0003682; F:chromatin binding; TAS:ProtInc.::GO:0042393; F:histone binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; TAS:ProtInc.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006335; P:DNA replication-dependent nucleosome assembly; TAS:ProtInc.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
687P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...2010.11     38.9     21     38GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
688Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1770.35     36.6     23     40GO:0005737; C:cytoplasm; ISS:UniProtKB.
689Q9XF57    317   PEX7_ARATH Peroxisome biogenesis protein 7 OS...2151.4     35     22     40GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
690B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...922.1     34.7     21     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
691P46800    329   GBLP_DICDI Guanine nucleotide-binding protein...2880.046     39.7     20     39GO:0005813; C:centrosome; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
records
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