UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YLL011W

Length:

489

Number of sequences:

5887

Description:

YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
631	P53699	684	CDC4_CANAX Cell division control protein 4 OS...	68	1.2	35.4	29	56
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
632	Q8N7N5	591	DCAF8_MOUSE DDB1- and CUL4-associated factor ...	174	0.002	44.3	23	39	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
633	Q9D2V7	922	CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...	135	4.8	33.5	21	47	GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
634	Q2GVT8	1258	SEC31_CHAGB Protein transport protein SEC31 O...	268	0.88	36.2	21	38	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
									GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
635	B2RZ17	454	FBXW2_RAT F-box/WD repeat-containing protein ...	103	0.14	38.1	25	49
636	Q10051	492	PRP19_CAEEL Pre-mRNA-processing factor 19 hom...	128	0.21	37.7	24	46	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
									GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
637	B5X9P2	330	CIO1A_SALSA Probable cytosolic iron-sulfur pr...	153	0.002	43.9	24	48
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
638	Q03897	1148	WDR59_YEAST Maintenance of telomere capping p...	116	0.002	44.7	28	52	GO:0097042; C:extrinsic to fungal-type vacuolar membrane; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
639	O13286	556	SRW1_SCHPO WD repeat-containing protein srw1 ...	156	0.002	44.3	22	49	GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
									GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IC:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.
640	P16371	730	GROU_DROME Protein groucho OS=Drosophila mela...	169	0.004	43.5	22	43	GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
									GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
									GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
641	Q2HDW0	782	ERB1_CHAGB Ribosome biogenesis protein ERB1 O...	151	0.002	44.3	26	46	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
642	Q9Y0T2	1247	FBXA_DICDI F-box/WD repeat-containing protein...	114	0.002	44.3	26	49	GO:0019005; C:SCF ubiquitin ligase complex; IDA:dictyBase.
									GO:0005515; F:protein binding; IPI:dictyBase.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
									GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0045595; P:regulation of cell differentiation; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IMP:dictyBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
643	Q9LJR3	845	SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...	169	0.084	39.3	22	47	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
									GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
644	Q5U2M6	591	DCAF8_RAT DDB1- and CUL4-associated factor 8 ...	174	0.002	44.3	23	39	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
645	Q5AZM3	1282	SEC31_EMENI Protein transport protein sec31 O...	238	0.002	44.3	21	42	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
									GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
646	Q6ZMW3	1958	EMAL6_HUMAN Echinoderm microtubule-associated...	354	0.002	44.3	20	38	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
647	Q54S79	942	WDR3_DICDI WD repeat-containing protein 3 hom...	325	0.33	37.4	22	37	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
648	Q3B7M6	659	NEDD1_BOVIN Protein NEDD1 OS=Bos taurus (Bovi...	121	0.21	37.7	24	44
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
649	Q9UT85	507	YIPC_SCHPO Uncharacterized WD repeat-containi...	81	0.94	35.8	27	49	GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
									GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
650	Q2GSM6	290	SEC13_CHAGB Protein transport protein SEC13 O...	275	0.63	35.8	18	40	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
651	Q7QJ33	428	WDR12_ANOGA Ribosome biogenesis protein WDR12...	340	0.002	43.9	20	38	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
652	B4MA12	397	WUHO_DROVI tRNA (guanine-N(7)-)-methyltransfe...	159	0.002	43.9	21	47	GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
									GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
653	C5PFX0	471	LIS1_COCP7 Nuclear distribution protein PAC1 ...	328	0.002	43.9	24	34	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
654	O43815	780	STRN_HUMAN Striatin OS=Homo sapiens (Human). ...	350	0.013	42	22	38	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
									GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; ISS:UniProtKB.::GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
									GO:0016358; P:dendrite development; ISS:UniProtKB.::GO:0007626; P:locomotory behavior; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0070830; P:tight junction assembly; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
655	B5X212	333	CIO1B_SALSA Probable cytosolic iron-sulfur pr...	155	0.003	43.5	26	48
									GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
656	Q8HXL3	1541	WDR62_PIG WD repeat-containing protein 62 OS=...	256	0.003	44.3	21	41	GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
657	P49026	326	GBLP_TOBAC Guanine nucleotide-binding protein...	66	2.3	34.3	38	50
658	Q9PTR5	410	LIS1_CHICK Lissencephaly-1 homolog OS=Gallus ...	337	0.017	41.2	18	38
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
659	P43033	410	LIS1_BOVIN Platelet-activating factor acetylh...	338	0.006	42.7	19	39	GO:0005829; C:cytosol; IDA:BHF-UCL.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
									GO:0034452; F:dynactin binding; IDA:BHF-UCL.::GO:0045502; F:dynein binding; IDA:BHF-UCL.::GO:0008201; F:heparin binding; IDA:BHF-UCL.::GO:0008017; F:microtubule binding; IDA:MGI.::GO:0043274; F:phospholipase binding; IDA:BHF-UCL.
									GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0046469; P:platelet activating factor metabolic process; IDA:BHF-UCL.::GO:0006810; P:transport; IEA:UniProtKB-KW.
660	D4AM37	663	SCONB_ARTBC Probable E3 ubiquitin ligase comp...	83	0.23	37.7	29	53
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
661	Q54Y96	530	SMU1_DICDI WD40 repeat-containing protein smu...	76	0.25	37.7	26	53	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.

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