Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...790.055     39.7     30     54
422Q96JK2    942   DCAF5_HUMAN DDB1- and CUL4-associated factor ...2470.1     38.9     22     37GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
423Q9USL1    309   YJKA_SCHPO Uncharacterized WD repeat-containi...1840.0001     47.8     22     39GO:0000346; C:transcription export complex; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; ISS:PomBase.
424O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2810.009     42     23     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
425A1CUD6    467   LIS11_ASPCL Nuclear distribution protein nudF...1200.18     38.1     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
426Q6NRH1    601   DCAF8_XENLA DDB1- and CUL4-associated factor ...1800.0001     48.1     22     41
427Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...2760.0001     48.1     22     42GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
428B4NW98    322   EIF3I_DROYA Eukaryotic translation initiation...2970.0001     47.4     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
429B3S4I5    409   LIS1_TRIAD Lissencephaly-1 homolog OS=Trichop...1330.019     40.8     23     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
430Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...800.27     37.7     35     49GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
431Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...3020.039     40     18     37
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
432Q5XIG8    350   STRAP_RAT Serine-threonine kinase receptor-as...630.73     35.8     32     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
433Q8K4Q0    1335   RPTOR_MOUSE Regulatory-associated protein of ...2150.0001     48.1     26     47GO:0005764; C:lysosome; ISS:UniProtKB.::GO:0031931; C:TORC1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016049; P:cell growth; ISS:UniProtKB.::GO:0071230; P:cellular response to amino acid stimulus; ISS:UniProtKB.::GO:0032008; P:positive regulation of TOR signaling cascade; ISS:UniProtKB.::GO:0031929; P:TOR signaling cascade; ISS:UniProtKB.
434Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...1170.15     38.1     21     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
435Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...2040.0002     47.8     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
436Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...1070.23     37.7     24     46GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
437O14021    431   PRW1_SCHPO RbAp48-related WD40 repeat-contain...1971.1     35.4     22     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0033698; C:Rpd3L complex; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0032221; C:Rpd3S complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0030261; P:chromosome condensation; IMP:PomBase.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
438Q8N122    1335   RPTOR_HUMAN Regulatory-associated protein of ...2140.0002     48.1     26     46GO:0005829; C:cytosol; TAS:Reactome.::GO:0005764; C:lysosome; IDA:UniProtKB.::GO:0031931; C:TORC1 complex; IDA:UniProtKB.
GO:0071889; F:14-3-3 protein binding; IDA:UniProtKB.::GO:0032403; F:protein complex binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0001030; F:RNA polymerase III type 1 promoter DNA binding; IDA:UniProtKB.::GO:0001031; F:RNA polymerase III type 2 promoter DNA binding; IDA:UniProtKB.::GO:0001032; F:RNA polymerase III type 3 promoter DNA binding; IDA:UniProtKB.::GO:0001156; F:TFIIIC-class transcription factor binding; IDA:UniProtKB.
GO:0007050; P:cell cycle arrest; TAS:Reactome.::GO:0016049; P:cell growth; IMP:UniProtKB.::GO:0071230; P:cellular response to amino acid stimulus; IMP:UniProtKB.::GO:0031669; P:cellular response to nutrient levels; IMP:UniProtKB.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0071902; P:positive regulation of protein serine/threonine kinase activity; IDA:UniProtKB.::GO:0032008; P:positive regulation of TOR signaling cascade; IDA:UniProtKB.::GO:0045945; P:positive regulation of transcription from RNA polymerase III promoter; IMP:UniProtKB.::GO:0008361; P:regulation of cell size; IMP:UniProtKB.::GO:0031929; P:TOR signaling cascade; IDA:UniProtKB.
439B4N0L0    322   EIF3I_DROWI Eukaryotic translation initiation...2580.0002     47.4     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
440P90648    732   MHCKB_DICDI Myosin heavy chain kinase B OS=Di...693.4     33.9     30     48GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.
441P42841    465   PFS2_YEAST Polyadenylation factor subunit 2 O...1122.1     34.7     24     47GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
442Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1170.05     39.7     22     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
443Q4RJN5    410   LIS1_TETNG Lissencephaly-1 homolog OS=nigrovi...3380.0003     46.6     20     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
444Q80T85    946   DCAF5_MOUSE DDB1- and CUL4-associated factor ...2390.3     37.4     22     37GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005739; C:mitochondrion; IDA:MGI.
445Q9VKQ3    420   WDR12_DROME Ribosome biogenesis protein WDR12...995.7     33.1     27     53GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
446Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...3310.0002     47.8     21     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
447Q9Z1Z2    350   STRAP_MOUSE Serine-threonine kinase receptor-...630.73     35.8     32     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005102; F:receptor binding; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; IDA:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
448P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...992.3     34.7     28     44GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
449Q9Y3F4    350   STRAP_HUMAN Serine-threonine kinase receptor-...630.63     36.2     32     49GO:0030054; C:cell junction; IDA:HPA.::GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
450A1DHK2    1263   SEC31_NEOFI Protein transport protein sec31 O...1168.9     32.7     26     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
451P0C7V8    602   DC8L2_HUMAN DDB1- and CUL4-associated factor ...1660.0002     47.8     25     41
records
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