Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...890.003     43.5     28     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
392O94365    494   UTP15_SCHPO U3 small nucleolar RNA-associated...1950.00007     48.9     25     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
393B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...991     35.4     27     53GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
394O24076    325   GBLP_MEDSA Guanine nucleotide-binding protein...2972.6     34.3     20     39
395Q2UG43    294   SEC13_ASPOR Protein transport protein sec13 O...3000.00007     48.1     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
396B8NGT5    706   SCONB_ASPFN Probable E3 ubiquitin ligase comp...3430.04     40.4     21     35
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
397Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...820.25     37.7     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
398P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2710.002     44.3     23     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
399Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...3120.00008     48.9     21     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
400Q2UGU1    455   LIS1_ASPOR Nuclear distribution protein nudF ...691.8     34.7     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
401B8N9H4    455   LIS1_ASPFN Nuclear distribution protein nudF ...691.8     34.7     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
402Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...3300.00008     48.9     21     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
403A2RRU3    528   UTP15_RAT U3 small nucleolar RNA-associated p...2530.00008     48.5     22     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
404Q54MP8    2200   Y5837_DICDI Bromodomain and WD repeat-contain...3810.00008     49.3     21     40
405Q7RZF5    304   SEC13_NEUCR Protein transport protein sec-13 ...1880.001     44.3     24     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
406A2QCU8    670   SCONB_ASPNC Probable E3 ubiquitin ligase comp...3330.001     45.1     21     40
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
407D4DG66    461   LIS1_TRIVH Nuclear distribution protein PAC1 ...1950.66     36.2     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
408D4AZ50    461   LIS1_ARTBC Nuclear distribution protein PAC1 ...1950.66     36.2     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
409Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...3090.0001     48.9     22     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
410Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...1160.006     42.7     23     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
411Q5R654    426   RBBP7_PONAB Histone-binding protein RBBP7 OS=...2732.1     34.7     22     38GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
412B7FNU7    439   LIS1_PHATC Lissencephaly-1 homolog OS=Phaeoda...1310.009     42     24     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
413Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2070.0001     48.1     23     41GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
414Q8CFJ9    790   WDR24_MOUSE WD repeat-containing protein 24 O...1600.0002     47.4     21     45
415Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...990.84     35.8     32     44
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
416Q28I90    604   DCAF8_XENTR DDB1- and CUL4-associated factor ...1740.0001     48.5     23     41
417Q4P9P9    453   LIS1_USTMA Nuclear distribution protein PAC1 ...680.43     36.6     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
418Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...850.25     37.7     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
419Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...846.5     32.7     30     48
420Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...1620.1     38.9     22     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
421Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...790.055     39.7     30     54
records
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