Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301A1CGS0    295   SEC13_ASPCL Protein transport protein sec13 O...2990.00001     50.4     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
302B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...2530.00001     50.8     27     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
303C1GB49    478   LIS1_PARBD Nuclear distribution protein PAC1 ...1750.054     39.7     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
304B2B766    468   LIS12_PODAN Nuclear distribution protein PAC1...3280.00001     51.2     23     35GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
305Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...2540.00001     51.2     23     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
306Q6TNS2    368   PK1IP_DANRE p21-activated protein kinase-inte...741.2     35.4     31     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
307Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...1170.00001     50.8     22     46GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
308Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...2720.0002     46.6     24     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
309O22607    507   MSI4_ARATH WD-40 repeat-containing protein MS...2770.00002     50.8     24     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0046872; F:metal ion binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
310C0S902    497   LIS1_PARBP Nuclear distribution protein PAC1 ...1750.081     39.3     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
311O76734    579   TUP1_DICDI General transcriptional corepresso...2630.002     44.3     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
312B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...2680.027     40.4     26     44GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
313A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...3130.00002     51.2     22     39GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
314Q9VZF4    1326   FBXW7_DROME F-box/WD repeat-containing protei...780.024     41.2     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; NAS:FlyBase.
GO:0030332; F:cyclin binding; TAS:FlyBase.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0008054; P:cyclin catabolic process; TAS:FlyBase.::GO:0042023; P:DNA endoreduplication; IMP:FlyBase.::GO:0060253; P:negative regulation of glial cell proliferation; IGI:FlyBase.::GO:0045926; P:negative regulation of growth; IMP:FlyBase.::GO:0007096; P:regulation of exit from mitosis; TAS:FlyBase.::GO:0007088; P:regulation of mitosis; IMP:FlyBase.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.
315Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1680.013     41.6     21     41GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
316Q17N69    409   LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes a...3550.003     43.5     21     35GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
317Q17963    376   TG125_CAEEL WD repeat-containing protein tag-...790.023     40.8     24     51GO:0005634; C:nucleus; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0051568; P:histone H3-K4 methylation; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
318Q7ZTY4    426   RBBP7_DANRE Histone-binding protein RBBP7 OS=...2450.007     42.4     22     40GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
319A4R3M4    461   LIS1_MAGO7 Nuclear distribution protein PAC1 ...3200.00002     50.4     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
320B4I195    326   EIF3I_DROSE Eukaryotic translation initiation...2970.00002     50.1     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
321O02195    326   EIF3I_DROME Eukaryotic translation initiation...2970.00002     50.1     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
322Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...3090.00002     50.8     22     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
323B3N4C7    326   EIF3I_DROER Eukaryotic translation initiation...2970.00002     50.1     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
324Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...871.9     34.7     26     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
325Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...870.73     35.8     32     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
326Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...870.73     35.8     32     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
327Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...2600.001     45.1     22     42
328B4Q354    326   EIF3I_DROSI Eukaryotic translation initiation...2970.00002     50.1     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
329Q6C414    1184   SEC31_YARLI Protein transport protein SEC31 O...2020.00002     50.8     23     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
330A7S338    409   LIS1_NEMVE Lissencephaly-1 homolog OS=Nematos...2940.0002     47     21     38GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
331Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...3090.00002     50.8     22     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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