Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YLL011W
Length:
489
Number of sequences:
5887
Description:
YLL011W SOF1 SGDID:S000003934, Chr XII from 127523-128992, Genome Release 64-1-1, Verified ORF, "Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...2720.03     40.8     20     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
152P52287    340   GBB3_RAT Guanine nucleotide-binding protein G...2620.1     38.5     24     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
153Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...2980.022     40.8     19     36
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
154Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...2190.27     37.4     23     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
155Q9BVA0    655   KTNB1_HUMAN Katanin p80 WD40-containing subun...2890.0002     48.1     20     38GO:0008352; C:katanin complex; TAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0008017; F:microtubule binding; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0031117; P:positive regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0006605; P:protein targeting; NAS:UniProtKB.
156Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...2940.2     38.1     21     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
157B6Q4Z5    660   SCONB_PENMQ Probable E3 ubiquitin ligase comp...820.097     38.9     33     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
158D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...1990.007     42.4     27     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
159O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...1540.0000006     55.1     24     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
160P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...940.0008     45.4     29     53GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
161Q5F201    620   WDR16_MOUSE WD repeat-containing protein 16 O...661.4     35     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
162O22467    424   MSI1_ARATH WD-40 repeat-containing protein MS...930.0000006     55.1     29     51GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; TAS:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; IMP:TAIR.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0031507; P:heterochromatin assembly; IMP:TAIR.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0009555; P:pollen development; IMP:TAIR.::GO:0045787; P:positive regulation of cell cycle; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.::GO:0006349; P:regulation of gene expression by genetic imprinting; IPI:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010214; P:seed coat development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010026; P:trichome differentiation; IMP:TAIR.
163O75529    589   TAF5L_HUMAN TAF5-like RNA polymerase II p300/...2530.026     40.8     19     41GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
164Q9D7H2    328   WDR5B_MOUSE WD repeat-containing protein 5B O...831.2     35     29     47
165Q8BG40    658   KTNB1_MOUSE Katanin p80 WD40-containing subun...2890.0002     47.4     20     38GO:0030424; C:axon; IDA:MGI.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0045502; F:dynein binding; IDA:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
166Q15542    800   TAF5_HUMAN Transcription initiation factor TF...505.9     33.1     34     50GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0005669; C:transcription factor TFIID complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0016573; P:histone acetylation; IDA:GOC.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.
167Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1442.4     34.3     24     42
168Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1050.004     43.1     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
169A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...3230.0004     46.6     21     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
170Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1050.004     43.1     28     50GO:0005730; C:nucleolus; IDA:HPA.
171Q9NDC9    404   LIS1_CAEEL Lissencephaly-1 homolog OS=Caenorh...2700.0006     45.8     23     39GO:0005818; C:aster; IDA:WormBase.::GO:0005938; C:cell cortex; IDA:WormBase.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:WormBase.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0043652; P:engulfment of apoptotic cell; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007018; P:microtubule-based movement; IMP:WormBase.::GO:0007100; P:mitotic centrosome separation; IMP:WormBase.::GO:0007052; P:mitotic spindle organization; IMP:WormBase.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0051225; P:spindle assembly; IMP:WormBase.::GO:0051932; P:synaptic transmission, GABAergic; IMP:WormBase.::GO:0048489; P:synaptic vesicle transport; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
172Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...2550.0000008     55.1     22     47
173Q95RJ9    700   EBI_DROME F-box-like/WD repeat-containing pro...1640.025     40.8     23     40GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0017053; C:transcriptional repressor complex; IGI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0042676; P:compound eye cone cell fate commitment; TAS:FlyBase.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IPI:GOC.::GO:0007219; P:Notch signaling pathway; TAS:FlyBase.::GO:0042461; P:photoreceptor cell development; IMP:FlyBase.::GO:0031065; P:positive regulation of histone deacetylation; IDA:FlyBase.::GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
174Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...3340.0000009     55.1     23     41GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
175P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...3230.0004     46.6     21     39GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
176Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...3230.011     42     20     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
177Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...832.2     34.3     29     47
178P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...3270.000001     55.1     21     43GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
179Q75BY3    425   PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS...1440.62     36.2     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
180Q94A40    1216   COPA1_ARATH Coatomer subunit alpha-1 OS=Arabi...3090.000001     55.1     22     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
181Q8C092    801   TAF5_MOUSE Transcription initiation factor TF...505.4     33.5     34     50GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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