Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR086W
Length:
1071
Number of sequences:
5887
Description:
YKR086W PRP16 SGDID:S000001794, Chr XI from 599857-603072, Genome Release 64-1-1, Verified ORF, "DEAH-box RNA helicase involved in second catalytic step of splicing; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181Q6BY27    536   DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS...871.9     36.2     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
182P95949    875   HELX_SULSO Uncharacterized ATP-dependent heli...3732.4     35.8     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
183P47545    357   Y303_MYCGE Putative ABC transporter ATP-bindi...832.4     35.4     30     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
184A6SCT6    592   DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS...3592.5     35.8     23     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
185A5E1W4    535   DBP3_LODEL ATP-dependent RNA helicase DBP3 OS...1032.5     35.8     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
186B1YKM7    1143   ADDB_EXIS2 ATP-dependent helicase/deoxyribonu...1452.7     35.8     23     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0000724; P:double-strand break repair via homologous recombination; IEA:InterPro.
187Q3APB5    440   TOLB_CHLCH Protein TolB OS=Chlorobium chloroc...772.8     35.4     26     49GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
GO:0017038; P:protein import; IEA:InterPro.
188Q2H1Q8    493   RRP3_CHAGB ATP-dependent rRNA helicase RRP3 O...3553.1     35.4     21     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
189O84783    753   PRIA_CHLTR Primosomal protein N' OS=Chlamydia...1793.4     35.4     24     44GO:0005658; C:alpha DNA polymerase:primase complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:UniProtKB-KW.
190Q0DBS1    590   RH51_ORYSJ Putative DEAD-box ATP-dependent RN...3013.6     35     24     38
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
191P49971    496   SR541_SOLLC Signal recognition particle 54 kD...1504.8     34.7     22     41GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
192A5UMY7    445   SRP54_METS3 Signal recognition particle 54 kD...604.8     34.7     37     58GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
193Q54CE0    785   DDX17_DICDI Probable ATP-dependent RNA helica...1064.8     35     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:dictyBase.::GO:0003724; F:RNA helicase activity; ISS:dictyBase.::GO:0008186; F:RNA-dependent ATPase activity; ISS:dictyBase.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
194Q4ZYK5    366   SELU_PSEU2 tRNA 2-selenouridine synthase OS=P...664.8     34.7     36     52
GO:0043828; F:tRNA 2-selenouridine synthase activity; IEA:InterPro.
GO:0070329; P:tRNA seleno-modification; IEA:InterPro.
195Q6FLF3    544   DBP2_CANGA ATP-dependent RNA helicase DBP2 OS...975.1     34.7     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
196A7EYW0    596   DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS...3645.2     34.7     22     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
197Q9PLE5    753   PRIA_CHLMU Primosomal protein N' OS=Chlamydia...3556     34.7     19     40GO:0005658; C:alpha DNA polymerase:primase complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:UniProtKB-KW.
198A1WIC3    365   SELU_VEREI tRNA 2-selenouridine synthase OS=V...406.5     34.3     50     63
GO:0043828; F:tRNA 2-selenouridine synthase activity; IEA:InterPro.
GO:0070329; P:tRNA seleno-modification; IEA:InterPro.
199Q6C024    575   PRP28_YARLI Pre-mRNA-splicing ATP-dependent R...1466.7     34.3     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
200Q889F6    366   SELU_PSESM tRNA 2-selenouridine synthase OS=P...627.3     33.9     39     52
GO:0043828; F:tRNA 2-selenouridine synthase activity; IEA:InterPro.
GO:0070329; P:tRNA seleno-modification; IEA:InterPro.
201Q58083    367   H669_METJA Probable ATP-dependent RNA helicas...1477.7     33.9     30     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
202A3MWX6    431   SRP54_PYRCJ Signal recognition particle 54 kD...617.7     33.9     39     57GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
203P0CR00    484   RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 O...3549.3     33.9     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
204P0CR01    484   RRP3_CRYNB ATP-dependent rRNA helicase RRP3 O...3549.3     33.9     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
205Q6C9P3    532   DBP3_YARLI ATP-dependent RNA helicase DBP3 OS...3989.7     33.9     23     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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