Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR062W
Length:
328
Number of sequences:
5887
Description:
YKR062W TFA2 SGDID:S000001770, Chr XI from 559666-560652, Genome Release 64-1-1, Verified ORF, "TFIIE small subunit, involved in RNA polymerase II transcription initiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P36145    328   T2EB_YEAST Transcription initiation factor II...3280     668     100     100GO:0005673; C:transcription factor TFIIE complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
2P79011    285   T2EB_SCHPO Transcription initiation factor II...2672e-42     154     34     55GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005673; C:transcription factor TFIIE complex; IDA:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; TAS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0051290; P:protein heterotetramerization; IDA:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
3Q54KJ8    276   T2EB_DICDI General transcription factor IIE s...1840.000000001     61.6     26     53GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
4Q2KJF9    289   T2EB_BOVIN General transcription factor IIE s...1620.0000001     55.8     31     47GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
5Q9D902    292   T2EB_MOUSE General transcription factor IIE s...1620.0000003     54.7     30     48GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
6P29084    291   T2EB_HUMAN Transcription initiation factor II...1620.0000009     53.1     30     46GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
7P29540    288   T2EB_XENLA General transcription factor IIE s...1570.000001     52.8     27     48GO:0005673; C:transcription factor TFIIE complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
8A8J6X1    359   BMT_GLELI Bergaptol O-methyltransferase OS=Gl...1020.5     35.8     29     43
GO:0030752; F:5-hydroxyfuranocoumarin 5-O-methyltransferase activity; IEA:EC.::GO:0008171; F:O-methyltransferase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
9O58762    415   TRET_PYRHO Trehalose synthase OS=NBRC 100139 ...1141.3     34.3     26     50
GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006006; P:glucose metabolic process; IEA:UniProtKB-KW.
10Q1MPL6    477   GATB_LAWIP Aspartyl/glutamyl-tRNA(Asn/Gln) am...552.1     33.9     38     62
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
11Q5ZUS9    292   EFTS_LEGPH Elongation factor Ts OS=ATCC 33152...1174     32.7     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
12A5ICK9    292   EFTS_LEGPC Elongation factor Ts OS=Legionella...1174     32.7     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
13P17076    256   RL8A_YEAST 60S ribosomal protein L8-A OS=Sacc...1004.3     32.3     23     47GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
14Q5WVY8    292   EFTS_LEGPL Elongation factor Ts OS=Legionella...1174.4     32.7     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
15Q7BHK8    195   AHPC_MYCTU Alkyl hydroperoxide reductase subu...984.6     32     31     50GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0008785; F:alkyl hydroperoxide reductase activity; IDA:MTBBASE.::GO:0032843; F:hydroperoxide reductase activity; IDA:MTBBASE.::GO:0004601; F:peroxidase activity; IDA:MTBBASE.::GO:0051920; F:peroxiredoxin activity; IDA:MTBBASE.::GO:0005515; F:protein binding; IPI:MTBBASE.
GO:0045454; P:cell redox homeostasis; IDA:MTBBASE.::GO:0051260; P:protein homooligomerization; IPI:MTBBASE.::GO:0051409; P:response to nitrosative stress; IMP:MTBBASE.
16Q7LYW5    412   TRET_THELI Trehalose synthase OS=Thermococcus...864.6     32.7     29     44
GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006006; P:glucose metabolic process; IEA:UniProtKB-KW.
17Q9HH00    412   TRET_PYRFU Trehalose synthase OS=Pyrococcus f...864.6     32.7     29     44
GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006006; P:glucose metabolic process; IEA:UniProtKB-KW.
18Q6T1F6    354   BMT_AMMMJ Bergaptol O-methyltransferase OS=Am...975.5     32.3     28     40
GO:0030752; F:5-hydroxyfuranocoumarin 5-O-methyltransferase activity; IEA:EC.::GO:0008171; F:O-methyltransferase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
19P19320    739   VCAM1_HUMAN Vascular cell adhesion protein 1 ...678.2     32     25     49GO:0071065; C:alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex; IDA:BHF-UCL.::GO:0045177; C:apical part of cell; IDA:BHF-UCL.::GO:0009897; C:external side of plasma membrane; IDA:BHF-UCL.::GO:0005615; C:extracellular space; IDA:BHF-UCL.::GO:0030175; C:filopodium; IDA:BHF-UCL.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005902; C:microvillus; IDA:BHF-UCL.::GO:0002102; C:podosome; IDA:BHF-UCL.
GO:0050839; F:cell adhesion molecule binding; IDA:BHF-UCL.::GO:0005178; F:integrin binding; IDA:BHF-UCL.
GO:0030183; P:B cell differentiation; IC:BHF-UCL.::GO:0007157; P:heterophilic cell-cell adhesion; IDA:BHF-UCL.::GO:0060333; P:interferon-gamma-mediated signaling pathway; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0050901; P:leukocyte tethering or rolling; IEP:BHF-UCL.::GO:0022614; P:membrane to membrane docking; IEP:BHF-UCL.::GO:0042102; P:positive regulation of T cell proliferation; IDA:BHF-UCL.::GO:0050776; P:regulation of immune response; TAS:Reactome.
20Q5X4J8    292   EFTS_LEGPA Elongation factor Ts OS=Legionella...1188.3     31.6     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
21A7HSA5    254   RLME_PARL1 Ribosomal RNA large subunit methyl...1289.9     31.2     28     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 21 1 - 21
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::