UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YKR060W

Length:

274

Number of sequences:

5887

Description:

YKR060W UTP30 SGDID:S000001768, Chr XI from 556518-557342, Genome Release 64-1-1, Verified ORF, "Subunit of U3-containing 90S preribosome complex involved in production of 18S rRNA and assembly of small ribosomal subunit"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P36144	274	RL1D1_YEAST Ribosome biogenesis protein UTP30...	274	0	557	100	100	GO:0030686; C:90S preribosome; IDA:SGD.::GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:SGD.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0042274; P:ribosomal small subunit biogenesis; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
2	Q9UT32	373	RL1DB_SCHPO Putative ribosome biogenesis prot...	225	0.000000000008	68.2	28	48	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:PomBase.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
3	Q5RCE6	490	RL1D1_PONAB Ribosomal L1 domain-containing pr...	195	0.0000008	53.5	29	50	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
4	O76021	490	RL1D1_HUMAN Ribosomal L1 domain-containing pr...	195	0.0000008	53.5	29	50	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0032880; P:regulation of protein localization; IMP:MGI.::GO:0006412; P:translation; IEA:InterPro.
5	A4FV97	482	RL1D1_BOVIN Ribosomal L1 domain-containing pr...	193	0.00003	48.5	26	46	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
6	P38779	376	CIC1_YEAST Proteasome-interacting protein CIC...	236	0.007	41.2	23	42	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.::GO:0000502; C:proteasome complex; IDA:SGD.
									GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0030674; F:protein binding, bridging; IMP:SGD.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0030163; P:protein catabolic process; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD.::GO:0006412; P:translation; IEA:InterPro.
7	Q9Y7R7	284	RL1DA_SCHPO Putative ribosome biogenesis prot...	264	0.033	38.9	21	45	GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:PomBase.
									GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:PomBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8	P52292	529	IMA2_HUMAN Importin subunit alpha-2 OS=Homo s...	77	0.34	35.8	29	49	GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
									GO:0042826; F:histone deacetylase binding; IPI:BHF-UCL.::GO:0008139; F:nuclear localization sequence binding; IDA:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
									GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006259; P:DNA metabolic process; TAS:ProtInc.::GO:0000085; P:G2 phase of mitotic cell cycle; TAS:ProtInc.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000072; P:M phase specific microtubule process; TAS:ProtInc.::GO:0006607; P:NLS-bearing substrate import into nucleus; IDA:UniProtKB.::GO:0000018; P:regulation of DNA recombination; TAS:ProtInc.
9	P11223	1162	SPIKE_IBVB Spike glycoprotein OS=Avian infect...	137	0.46	35.8	21	42	GO:0044173; C:host cell endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0019031; C:viral envelope; IEA:InterPro.::GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
									GO:0006944; P:cellular membrane fusion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0019064; P:viral envelope fusion with host membrane; IEA:InterPro.::GO:0046813; P:virion attachment, binding of host cell surface receptor; IEA:InterPro.
10	P51456	178	RELH_RABIT Relaxin-like protein SQ10 OS=Oryct...	95	0.49	34.7	31	48	GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
									GO:0005179; F:hormone activity; IEA:UniProtKB-KW.
11	P52293	529	IMA2_MOUSE Importin subunit alpha-2 OS=Mus mu...	77	2.7	33.1	29	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0008565; F:protein transporter activity; IEA:InterPro.
12	Q52BY4	161	MBF1_MAGO7 Multiprotein-bridging factor 1 OS=...	62	5.3	31.6	34	52
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13	Q535K8	2256	GON4L_RAT GON-4-like protein OS=Rattus norveg...	134	7	32	29	46	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.

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