Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR056W
Length:
639
Number of sequences:
5887
Description:
YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q2L016    476   RLMD_BORA1 23S rRNA (uracil(1939)-C(5))-methy...4870.000000002     63.9     21     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
542Q5RFM7    486   TRM2_PONAB tRNA (uracil(54)-C(5))-methyltrans...1620.000000002     63.9     24     46
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
543Q46ZH7    463   RLMD_CUPPJ 23S rRNA (uracil(1939)-C(5))-methy...740.024     41.2     31     54
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
544Q8L7S3    809   C3H24_ARATH Zinc finger CCCH domain-containin...1100.000000004     63.5     31     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
545B3GXZ9    391   RLMC_ACTP7 23S rRNA (uracil(747)-C(5))-methyl...1510.000000005     62.4     28     48
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
546Q8D4B4    376   RLMC_VIBVU 23S rRNA (uracil(747)-C(5))-methyl...2050.000000006     62     24     49
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
547Q9A8M7    415   Y1326_CAUCR Uncharacterized RNA methyltransfe...4730.00000002     60.8     22     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
548Q96GJ1    504   TRM2_HUMAN tRNA (uracil(54)-C(5))-methyltrans...1620.00000002     60.8     23     45
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
549E1V4F9    483   RLMD_HALED 23S rRNA (uracil(1939)-C(5))-methy...4610.00000003     60.1     20     37
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
550Q6M9M7    383   Y1998_PARUW Uncharacterized RNA methyltransfe...1990.00000004     59.3     23     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
551Q8G290    415   Y438_BRUSU Uncharacterized RNA methyltransfer...4780.00000008     58.5     22     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
552F5ZEI8    473   RLMD_ALTSS 23S rRNA (uracil(1939)-C(5))-methy...2020.00000008     58.9     27     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
553Q8BQJ6    493   TRM2_MOUSE tRNA (uracil(54)-C(5))-methyltrans...2000.0000001     58.5     23     40GO:0005739; C:mitochondrion; IDA:MGI.
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
554Q128S1    486   RLMD_POLSJ 23S rRNA (uracil(1939)-C(5))-methy...2300.0000002     57.4     27     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
555A1TSE0    491   RLMD_ACIAC 23S rRNA (uracil(1939)-C(5))-methy...2270.0000002     57.4     25     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
556Q9JP88    473   RLMD_RUBGE 23S rRNA (uracil(1939)-C(5))-methy...2030.0000007     55.8     30     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
557A1W8J9    482   RLMD_ACISJ 23S rRNA (uracil(1939)-C(5))-methy...2260.0000009     55.5     25     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
558Q92RJ3    415   Y878_RHIME Uncharacterized RNA methyltransfer...4790.0000009     55.1     23     38
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
559Q8YFM4    415   Y1496_BRUME Uncharacterized RNA methyltransfe...4780.000002     53.9     22     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
560A1WME3    486   RLMD_VEREI 23S rRNA (uracil(1939)-C(5))-methy...2220.000004     53.5     27     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
561Q21UR3    477   RLMD_RHOFD 23S rRNA (uracil(1939)-C(5))-methy...1840.00001     51.6     24     42
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
562Q8BNV1    574   TRM2A_MOUSE tRNA (uracil-5-)-methyltransferas...2030.00002     51.6     24     41
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
563Q6NB80    412   Y948_RHOPA Uncharacterized RNA methyltransfer...4870.00005     49.7     20     36
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
564Q985X9    412   Y7480_RHILO Uncharacterized RNA methyltransfe...2080.00006     49.7     25     46
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
565Q82TM7    393   Y1857_NITEU Uncharacterized RNA methyltransfe...1440.0004     46.6     26     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
566A0KKF0    397   RLMI_AERHH Ribosomal RNA large subunit methyl...970.0007     45.8     33     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008649; F:rRNA methyltransferase activity; IEA:InterPro.
567C4LAF1    292   PRMA_TOLAT Ribosomal protein L11 methyltransf...530.0008     45.4     42     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008276; F:protein methyltransferase activity; IEA:InterPro.
568Q9X3W2    397   Y1179_ZYMMO Uncharacterized RNA methyltransfe...790.002     44.7     32     52
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
569B8CHY3    293   PRMA_SHEPW Ribosomal protein L11 methyltransf...550.002     44.3     38     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008276; F:protein methyltransferase activity; IEA:InterPro.
570Q58338    197   Y928_METJA Putative protein methyltransferase...820.003     43.1     35     57
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
571Q6LLY5    294   PRMA_PHOPR Ribosomal protein L11 methyltransf...550.003     43.5     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008276; F:protein methyltransferase activity; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 733 541 - 570
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