Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR056W
Length:
639
Number of sequences:
5887
Description:
YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511B1LN12    375   RLMC_ECOSM 23S rRNA (uracil(747)-C(5))-methyl...2060.00000000001     70.1     24     46
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
512A7GY40    364   TRMA_CAMC5 tRNA (uracil(54)-C(5))-methyltrans...2020.00000000002     69.3     26     45
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
513Q1LLI5    466   RLMD_RALME 23S rRNA (uracil(1939)-C(5))-methy...4850.00000000003     69.7     22     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
514A6VCH5    363   TRMA_PSEA7 tRNA (uracil(54)-C(5))-methyltrans...1600.00000000003     68.9     33     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
515Q02FV3    363   TRMA_PSEAB tRNA (uracil(54)-C(5))-methyltrans...2070.00000000003     68.9     29     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
516Q8FPI1    421   Y1797_COREF Uncharacterized RNA methyltransfe...2380.00000000004     68.9     25     44
GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
517A5EXH9    361   TRMA_DICNV tRNA (uracil(54)-C(5))-methyltrans...2110.00000000005     68.2     27     45
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
518Q8Y035    450   RLMD_RALSO 23S rRNA (uracil(1939)-C(5))-methy...1340.06     40     23     48
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
519B5EPA4    440   RLMD_ACIF5 23S rRNA (uracil(1939)-C(5))-methy...4750.00000000008     68.2     21     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
520B7J921    440   RLMD_ACIF2 23S rRNA (uracil(1939)-C(5))-methy...4750.00000000008     68.2     21     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
521Q7MFU0    376   RLMC_VIBVY 23S rRNA (uracil(747)-C(5))-methyl...2030.00000000009     67.8     25     49
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
522Q7W676    466   RLMD_BORPA 23S rRNA (uracil(1939)-C(5))-methy...4910.0000000001     67.8     20     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
523Q7NWP9    514   RLMD_CHRVO 23S rRNA (uracil(1939)-C(5))-methy...4690.0000000001     67.8     21     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
524A5EXR9    424   RLMD_DICNV 23S rRNA (uracil(1939)-C(5))-methy...5010.0000000001     67.4     20     36
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
525Q3JCY2    447   RLMD_NITOC 23S rRNA (uracil(1939)-C(5))-methy...1660.000005     53.1     26     46
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
526Q7WI42    466   RLMD_BORBR 23S rRNA (uracil(1939)-C(5))-methy...4910.0000000002     67.4     20     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
527A5CXB2    439   RLMD_VESOH 23S rRNA (uracil(1939)-C(5))-methy...1570.0000000002     67.4     29     50
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
528Q7U326    404   TRMA_HELHP tRNA (uracil(54)-C(5))-methyltrans...1660.0000000002     67     27     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
529A6VKU5    383   RLMC_ACTSZ 23S rRNA (uracil(747)-C(5))-methyl...2030.0000000003     65.9     25     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
530Q5P8D0    368   TRMA_AROAE tRNA (uracil(54)-C(5))-methyltrans...1600.0000000003     65.9     26     46
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
531B8F5M9    389   RLMC_HAEPS 23S rRNA (uracil(747)-C(5))-methyl...2050.0000000003     65.9     25     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
532B2U9U3    450   RLMD_RALPJ 23S rRNA (uracil(1939)-C(5))-methy...1342.7     34.7     22     47
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
533Q73JF6    404   Y2619_TREDE Uncharacterized RNA methyltransfe...790.6     36.6     29     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
534Q0K956    441   RLMD_CUPNH 23S rRNA (uracil(1939)-C(5))-methy...740.12     38.9     27     55
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
535A3N1B8    391   RLMC_ACTP2 23S rRNA (uracil(747)-C(5))-methyl...1510.0000000007     65.1     28     49
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
536Q65VK8    389   RLMC_MANSM 23S rRNA (uracil(747)-C(5))-methyl...2030.000000001     64.7     27     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
537Q7VXM6    466   RLMD_BORPE 23S rRNA (uracil(1939)-C(5))-methy...4910.000000001     64.7     20     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
538A1VQF1    490   RLMD_POLNA 23S rRNA (uracil(1939)-C(5))-methy...2300.000000001     64.3     26     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
539B0BQ52    391   RLMC_ACTPJ 23S rRNA (uracil(747)-C(5))-methyl...1490.000000001     63.9     27     48
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
540F2GA29    482   RLMD_ALTMD 23S rRNA (uracil(1939)-C(5))-methy...4490.000000002     63.9     21     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
541Q2L016    476   RLMD_BORA1 23S rRNA (uracil(1939)-C(5))-methy...4870.000000002     63.9     21     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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