Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR056W
Length:
639
Number of sequences:
5887
Description:
YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391A3QB25    379   RLMC_SHELP 23S rRNA (uracil(747)-C(5))-methyl...1470.000000000000009     80.1     29     53
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
392B0VCX5    361   TRMA_ACIBY tRNA (uracil(54)-C(5))-methyltrans...1770.000000000000009     79.7     29     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
393Q8EI67    386   RLMC_SHEON 23S rRNA (uracil(747)-C(5))-methyl...1790.000000000000009     80.1     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
394A4XQI3    362   TRMA_PSEMY tRNA (uracil(54)-C(5))-methyltrans...2070.00000000000001     79.7     29     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
395Q72W54    415   Y086_LEPIC Uncharacterized RNA methyltransfer...1470.00000000000001     80.1     30     50
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
396C5BC48    366   TRMA_EDWI9 tRNA (uracil(54)-C(5))-methyltrans...1930.00000000000001     79.3     31     49
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
397Q8F9U1    415   Y098_LEPIN Uncharacterized RNA methyltransfer...1470.00000000000001     80.1     30     50
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
398Q0BEW2    465   RLMD_BURCM 23S rRNA (uracil(1939)-C(5))-methy...5020.00000000000001     80.1     22     42
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
399B2HTF7    463   RLMD_ACIBC 23S rRNA (uracil(1939)-C(5))-methy...4950.00000000000002     79.7     22     42
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
400B1JRJ4    376   RLMC_YERPY 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000002     79     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
401A7FK27    376   RLMC_YERP3 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000002     79     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
402Q089S7    365   TRMA_SHEFN tRNA (uracil(54)-C(5))-methyltrans...1600.00000000000002     79     32     49
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
403C6DDJ9    449   RLMD_PECCP 23S rRNA (uracil(1939)-C(5))-methy...4500.00000000000002     79.3     23     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
404Q5P841    433   RLMD_AROAE 23S rRNA (uracil(1939)-C(5))-methy...4750.00000000000002     79.3     24     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
405Q66CN7    376   RLMC_YERPS 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000003     78.6     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
406B2K9X0    376   RLMC_YERPB 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000003     78.6     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
407A1JM74    375   RLMC_YERE8 23S rRNA (uracil(747)-C(5))-methyl...3150.00000000000003     78.6     23     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
408E1W218    436   RLMD_HAEP3 23S rRNA (uracil(1939)-C(5))-methy...4050.00000000000003     79     22     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
409A6TD57    434   RLMD_KLEP7 23S rRNA (uracil(1939)-C(5))-methy...4860.00000000000003     79     21     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
410B0VKL3    463   RLMD_ACIBS 23S rRNA (uracil(1939)-C(5))-methy...4970.00000000000004     78.6     22     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
411D3VBF7    375   RLMC_XENNA 23S rRNA (uracil(747)-C(5))-methyl...2100.00000000000004     77.8     25     49
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
412C1DLS8    361   TRMA_AZOVD tRNA (uracil(54)-C(5))-methyltrans...2110.00000000000005     77.4     30     48
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
413B5XV15    434   RLMD_KLEP3 23S rRNA (uracil(1939)-C(5))-methy...1950.00000000000006     78.2     28     46
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
414Q6D3S2    375   RLMC_ERWCT 23S rRNA (uracil(747)-C(5))-methyl...1870.00000000000006     77.4     27     48
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
415Q5PEJ4    431   RLMD_SALPA 23S rRNA (uracil(1939)-C(5))-methy...4910.00000000000007     77.8     22     38
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
416C5B8X6    438   RLMD_EDWI9 23S rRNA (uracil(1939)-C(5))-methy...2040.00000000000007     77.8     25     49
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
417Q6FBS0    361   TRMA_ACIAD tRNA (uracil(54)-C(5))-methyltrans...2100.00000000000007     77     29     46
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
418Q087X5    377   RLMC_SHEFN 23S rRNA (uracil(747)-C(5))-methyl...1810.00000000000008     77     24     47
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
419A4TN73    376   RLMC_YERPP 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000008     77     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
420Q1CGA8    376   RLMC_YERPN 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000008     77     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
421A9R4V6    376   RLMC_YERPG 23S rRNA (uracil(747)-C(5))-methyl...2940.00000000000008     77     23     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
records
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