Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR056W
Length:
639
Number of sequences:
5887
Description:
YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271A6WS34    390   RLMC_SHEB8 23S rRNA (uracil(747)-C(5))-methyl...1792e-16     85.1     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
272B4TQI0    366   TRMA_SALSV tRNA (uracil(54)-C(5))-methyltrans...1682e-16     84.7     30     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
273B5F0V3    366   TRMA_SALA4 tRNA (uracil(54)-C(5))-methyltrans...1682e-16     84.7     30     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
274Q39FQ4    465   RLMD_BURS3 23S rRNA (uracil(1939)-C(5))-methy...4992e-16     85.9     23     42
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
275Q9CK32    365   TRMA_PASMU tRNA (uracil(54)-C(5))-methyltrans...2052e-16     84.7     28     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
276Q7N839    438   RLMD_PHOLL 23S rRNA (uracil(1939)-C(5))-methy...4972e-16     85.5     24     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
277Q48DT0    361   TRMA_PSE14 tRNA (uracil(54)-C(5))-methyltrans...2132e-16     84.3     33     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
278Q5UQK3    389   YR405_MIMIV Putative RNA methyltransferase R4...4132e-16     84.7     26     40
GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
279Q4ZNF5    361   TRMA_PSEU2 tRNA (uracil(54)-C(5))-methyltrans...2133e-16     84.3     32     49
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
280B6ENT4    368   TRMA_ALISL tRNA (uracil(54)-C(5))-methyltrans...2063e-16     84.3     29     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
281A8H8Q9    378   RLMC_SHEPA 23S rRNA (uracil(747)-C(5))-methyl...1793e-16     84.3     28     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
282A1U2U9    449   RLMD_MARAV 23S rRNA (uracil(1939)-C(5))-methy...4764e-16     85.1     22     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
283B8CH56    365   TRMA_SHEPW tRNA (uracil(54)-C(5))-methyltrans...1654e-16     84     33     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
284A8G1G7    365   TRMA_SHESH tRNA (uracil(54)-C(5))-methyltrans...1605e-16     83.6     33     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
285Q6M4B7    412   Y1903_CORGL Uncharacterized RNA methyltransfe...4755e-16     84.3     23     39
GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
286A4SHG2    377   TRMA_AERS4 tRNA (uracil(54)-C(5))-methyltrans...1606e-16     83.6     32     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
287Q65PY6    364   TRMA_MANSM tRNA (uracil(54)-C(5))-methyltrans...1596e-16     83.2     34     52
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
288B1J3Q4    361   TRMA_PSEPW tRNA (uracil(54)-C(5))-methyltrans...2076e-16     83.2     32     49
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
289B1KN03    365   TRMA_SHEWM tRNA (uracil(54)-C(5))-methyltrans...1657e-16     83.2     33     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
290C3LPZ5    369   TRMA_VIBCM tRNA (uracil(54)-C(5))-methyltrans...2047e-16     83.2     27     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
291Q9KVJ0    369   TRMA_VIBCH tRNA (uracil(54)-C(5))-methyltrans...2047e-16     83.2     27     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
292A5F4M4    369   TRMA_VIBC3 tRNA (uracil(54)-C(5))-methyltrans...2047e-16     83.2     27     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
293A9N0H5    366   TRMA_SALPB tRNA (uracil(54)-C(5))-methyltrans...1687e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
294A1KV88    367   TRMA_NEIMF tRNA (uracil(54)-C(5))-methyltrans...1978e-16     83.2     31     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
295A9M1Q1    367   TRMA_NEIM0 tRNA (uracil(54)-C(5))-methyltrans...1978e-16     83.2     31     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
296A4Y9Y4    389   RLMC_SHEPC 23S rRNA (uracil(747)-C(5))-methyl...1798e-16     83.2     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
297P22038    366   TRMA_SALTY tRNA (uracil(54)-C(5))-methyltrans...1688e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
298B5REZ3    366   TRMA_SALG2 tRNA (uracil(54)-C(5))-methyltrans...1688e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
299B5QXR0    366   TRMA_SALEP tRNA (uracil(54)-C(5))-methyltrans...1688e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
300B5FPX9    366   TRMA_SALDC tRNA (uracil(54)-C(5))-methyltrans...1688e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
301Q57H88    366   TRMA_SALCH tRNA (uracil(54)-C(5))-methyltrans...1688e-16     83.2     29     51
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
records
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