Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR056W
Length:
639
Number of sequences:
5887
Description:
YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241B7VK72    442   RLMD_VIBSL 23S rRNA (uracil(1939)-C(5))-methy...4863e-17     88.2     24     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
242B1KPU0    443   RLMD_SHEWM 23S rRNA (uracil(1939)-C(5))-methy...4594e-17     88.2     24     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
243C6DHQ1    367   TRMA_PECCP tRNA (uracil(54)-C(5))-methyltrans...1604e-17     87     33     55
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
244A6QBC0    371   TRMA_SULNB tRNA (uracil(54)-C(5))-methyltrans...2514e-17     87     30     46
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
245Q086B4    455   RLMD_SHEFN 23S rRNA (uracil(1939)-C(5))-methy...4624e-17     88.2     23     40
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
246A8AKV5    366   TRMA_CITK8 tRNA (uracil(54)-C(5))-methyltrans...1914e-17     87     30     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
247A4WG46    366   TRMA_ENT38 tRNA (uracil(54)-C(5))-methyltrans...1684e-17     87     31     52
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
248A1SSL6    365   TRMA_PSYIN tRNA (uracil(54)-C(5))-methyltrans...1615e-17     86.7     33     53
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
249B0TUZ2    378   RLMC_SHEHH 23S rRNA (uracil(747)-C(5))-methyl...1795e-17     86.7     28     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
250Q5H1Q8    444   RLMD_XANOR 23S rRNA (uracil(1939)-C(5))-methy...4936e-17     87.4     24     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
251Q3YV11    366   TRMA_SHISS tRNA (uracil(54)-C(5))-methyltrans...1686e-17     86.3     32     52
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
252B2TWG0    366   TRMA_SHIB3 tRNA (uracil(54)-C(5))-methyltrans...1686e-17     86.3     32     52
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
253B4F1H4    365   TRMA_PROMH tRNA (uracil(54)-C(5))-methyltrans...1668e-17     85.9     29     52
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
254Q6MGU3    393   Y3828_BDEBA Uncharacterized RNA methyltransfe...4659e-17     86.3     22     38
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
255A1S382    384   RLMC_SHEAM 23S rRNA (uracil(747)-C(5))-methyl...1949e-17     86.3     28     45
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
256Q3BVV1    444   RLMD_XANC5 23S rRNA (uracil(1939)-C(5))-methy...4721e-16     86.7     25     44
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
257Q87WA0    361   TRMA_PSESM tRNA (uracil(54)-C(5))-methyltrans...2131e-16     85.5     33     48
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
258Q0I127    439   RLMD_HAES1 23S rRNA (uracil(1939)-C(5))-methy...4461e-16     86.3     23     41
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
259Q87KN8    369   TRMA_VIBPA tRNA (uracil(54)-C(5))-methyltrans...2281e-16     85.5     29     46
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
260Q32CD0    433   RLMD_SHIDS 23S rRNA (uracil(1939)-C(5))-methy...4881e-16     86.3     22     38
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
261Q8IZ69    625   TRM2A_HUMAN tRNA (uracil-5-)-methyltransferas...2051e-16     87     28     47
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
262Q8XED8    433   RLMD_ECO57 23S rRNA (uracil(1939)-C(5))-methy...4881e-16     86.3     22     39
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
263Q2P4L7    444   RLMD_XANOM 23S rRNA (uracil(1939)-C(5))-methy...4931e-16     86.3     24     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
264B2VGA5    367   TRMA_ERWT9 tRNA (uracil(54)-C(5))-methyltrans...2071e-16     85.1     29     49
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
265B7VM88    369   TRMA_VIBSL tRNA (uracil(54)-C(5))-methyltrans...2062e-16     85.1     31     47
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
266A9L1I5    390   RLMC_SHEB9 23S rRNA (uracil(747)-C(5))-methyl...1792e-16     85.5     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
267B8E5Q5    390   RLMC_SHEB2 23S rRNA (uracil(747)-C(5))-methyl...1792e-16     85.5     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
268Q9Z721    401   Y885_CHLPN Uncharacterized RNA methyltransfer...1922e-16     85.5     30     50
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
269Q5QVT1    366   TRMA_IDILO tRNA (uracil(54)-C(5))-methyltrans...1652e-16     85.1     29     53
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
270Q1I4J8    361   TRMA_PSEE4 tRNA (uracil(54)-C(5))-methyltrans...2072e-16     85.1     31     50
GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
271A6WS34    390   RLMC_SHEB8 23S rRNA (uracil(747)-C(5))-methyl...1792e-16     85.1     26     51
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0016436; F:rRNA (uridine) methyltransferase activity; IEA:InterPro.
records
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