UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YKR056W

Length:

639

Number of sequences:

5887

Description:

YKR056W TRM2 SGDID:S000001764, Chr XI from 549448-551367, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
121	A8FSS4	442	RLMD_SHESH 23S rRNA (uracil(1939)-C(5))-methy...	476	1e-20	98.2	23	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
122	A5IBU7	444	RLMD_LEGPC 23S rRNA (uracil(1939)-C(5))-methy...	482	2e-20	98.2	22	44
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
123	Q5X5A8	444	RLMD_LEGPA 23S rRNA (uracil(1939)-C(5))-methy...	482	2e-20	97.8	22	43
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
124	Q31DJ1	407	RLMD_THICR 23S rRNA (uracil(1939)-C(5))-methy...	466	3e-20	97.1	24	40
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
125	Q12PZ8	468	RLMD_SHEDO 23S rRNA (uracil(1939)-C(5))-methy...	502	3e-20	97.8	23	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
126	B8CJP2	445	RLMD_SHEPW 23S rRNA (uracil(1939)-C(5))-methy...	457	4e-20	97.1	25	40
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
127	Q5E320	438	RLMD_VIBF1 23S rRNA (uracil(1939)-C(5))-methy...	473	6e-20	96.3	22	45
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
128	Q6F847	463	RLMD_ACIAD 23S rRNA (uracil(1939)-C(5))-methy...	489	7e-20	96.7	22	43
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
129	B0BU06	368	TRMA_ACTPJ tRNA (uracil(54)-C(5))-methyltrans...	160	1e-19	94.7	34	53
									GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
130	Q31JA4	374	TRMA_THICR tRNA (uracil(54)-C(5))-methyltrans...	224	1e-19	94.7	31	49
									GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
131	Q3SK67	432	RLMD_THIDA 23S rRNA (uracil(1939)-C(5))-methy...	480	1e-19	95.5	24	43
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
132	Q2SWE9	465	RLMD_BURTA 23S rRNA (uracil(1939)-C(5))-methy...	496	2e-19	95.5	24	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
133	A1SSB8	444	RLMD_PSYIN 23S rRNA (uracil(1939)-C(5))-methy...	470	2e-19	95.1	23	45
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
134	A4SRC5	439	RLMD_AERS4 23S rRNA (uracil(1939)-C(5))-methy...	456	2e-19	94.7	22	41
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
135	O54099	458	Y5901_STRCO Uncharacterized RNA methyltransfe...	476	3e-19	94.7	24	40
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006396; P:RNA processing; IEA:InterPro.
136	A1K4G2	433	RLMD_AZOSB 23S rRNA (uracil(1939)-C(5))-methy...	465	3e-19	94.4	25	43
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
137	Q0A8Y4	445	RLMD_ALHEH 23S rRNA (uracil(1939)-C(5))-methy...	404	3e-19	94.4	25	41
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
138	Q7MAX6	366	TRMA_PHOLL tRNA (uracil(54)-C(5))-methyltrans...	176	3e-19	93.2	30	53
									GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
139	B5FAG4	438	RLMD_VIBFM 23S rRNA (uracil(1939)-C(5))-methy...	472	3e-19	94.4	22	44
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
140	Q5R111	450	RLMD_IDILO 23S rRNA (uracil(1939)-C(5))-methy...	442	3e-19	94.4	23	41
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
141	A8H1S1	445	RLMD_SHEPA 23S rRNA (uracil(1939)-C(5))-methy...	478	4e-19	94	24	41
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
142	Q87LP5	439	RLMD_VIBPA 23S rRNA (uracil(1939)-C(5))-methy...	482	5e-19	94	24	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
143	Q63UT8	465	RLMD_BURPS 23S rRNA (uracil(1939)-C(5))-methy...	492	5e-19	94	23	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
144	Q3JRP8	465	RLMD_BURP1 23S rRNA (uracil(1939)-C(5))-methy...	492	5e-19	94	23	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
145	Q62JV9	465	RLMD_BURMA 23S rRNA (uracil(1939)-C(5))-methy...	492	5e-19	94	23	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
146	A6WR37	450	RLMD_SHEB8 23S rRNA (uracil(1939)-C(5))-methy...	468	6e-19	93.6	24	41
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
147	Q9CJX3	437	RLMD_PASMU 23S rRNA (uracil(1939)-C(5))-methy...	472	6e-19	93.6	21	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
148	Q47WQ1	469	RLMD_COLP3 23S rRNA (uracil(1939)-C(5))-methy...	489	7e-19	93.6	22	42
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
149	A3D7B5	450	RLMD_SHEB5 23S rRNA (uracil(1939)-C(5))-methy...	480	9e-19	93.2	24	39
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
150	B8F7Z1	369	TRMA_HAEPS tRNA (uracil(54)-C(5))-methyltrans...	207	1e-18	91.7	32	49
									GO:0009021; F:tRNA (uracil-5-)-methyltransferase activity; IEA:EC.
151	A9KYI1	450	RLMD_SHEB9 23S rRNA (uracil(1939)-C(5))-methy...	472	1e-18	92.8	24	39
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.

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