Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR055W
Length:
291
Number of sequences:
5887
Description:
YKR055W RHO4 SGDID:S000001763, Chr XI from 548216-549091, Genome Release 64-1-1, Verified ORF, "Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451P51147    216   RAB5C_CANFA Ras-related protein Rab-5C OS=Can...1610.000000000000004     75.9     29     50GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
452P79735    215   RAN_DANRE GTP-binding nuclear protein Ran OS=...1210.000000000000004     75.9     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
453Q9SN68    200   RAF2B_ARATH Ras-related protein RABF2b OS=Ara...1590.000000000000004     75.5     29     50GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
454P32835    219   GSP1_YEAST GTP-binding nuclear protein GSP1/C...1200.000000000000004     75.9     37     56GO:0005737; C:cytoplasm; TAS:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IGI:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; TAS:SGD.::GO:0006997; P:nucleus organization; IGI:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
455Q40521    217   RB11B_TOBAC Ras-related protein Rab11B OS=Nic...1630.000000000000004     75.9     31     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
456P48555    201   RALA_DROME Ras-related protein Ral-a OS=Droso...1650.000000000000004     75.5     29     53GO:0005886; C:plasma membrane; IDA:FlyBase.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IDA:FlyBase.::GO:0030165; F:PDZ domain binding; IPI:FlyBase.
GO:0007298; P:border follicle cell migration; IMP:FlyBase.::GO:0007391; P:dorsal closure; NAS:FlyBase.::GO:0045087; P:innate immune response; IDA:FlyBase.::GO:0046329; P:negative regulation of JNK cascade; IGI:FlyBase.::GO:0007464; P:R3/R4 cell fate commitment; IMP:FlyBase.::GO:0022604; P:regulation of cell morphogenesis; IMP:FlyBase.::GO:0008593; P:regulation of Notch signaling pathway; IGI:FlyBase.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
457Q5R7L7    216   RAB5C_PONAB Ras-related protein Rab-5C OS=Pon...1610.000000000000004     75.9     29     50GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
458P51148    216   RAB5C_HUMAN Ras-related protein Rab-5C OS=Hom...1610.000000000000004     75.9     29     50GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.::GO:0005811; C:lipid particle; IDA:UniProtKB.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; TAS:ProtInc.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
459Q9YGC0    215   RAN_SALSA GTP-binding nuclear protein Ran OS=...1210.000000000000004     75.9     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
460P28187    214   RAA5C_ARATH Ras-related protein RABA5c OS=Ara...1740.000000000000004     75.9     32     49GO:0005829; C:cytosol; IDA:TAIR.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005795; C:Golgi stack; IDA:TAIR.::GO:0005798; C:Golgi-associated vesicle; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005802; C:trans-Golgi network; IDA:TAIR.
GO:0005525; F:GTP binding; IDA:UniProtKB.::GO:0003924; F:GTPase activity; IDA:UniProtKB.
GO:0048219; P:inter-Golgi cisterna vesicle-mediated transport; TAS:TAIR.::GO:0015031; P:protein transport; IEA:InterPro.::GO:0009408; P:response to heat; IEP:TAIR.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
461P35278    216   RAB5C_MOUSE Ras-related protein Rab-5C OS=Mus...1610.000000000000005     75.5     29     50GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.::GO:0030139; C:endocytic vesicle; IDA:MGI.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; TAS:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0007032; P:endosome organization; IDA:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0030100; P:regulation of endocytosis; IDA:MGI.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
462P41915    225   RAN_TETTH GTP-binding nuclear protein Ran OS=...1210.000000000000005     75.9     37     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
463Q55CB0    213   RASU_DICDI Ras-like protein rasU OS=Dictyoste...1900.000000000000005     75.5     30     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; ISS:dictyBase.::GO:0003924; F:GTPase activity; ISS:dictyBase.
GO:0007265; P:Ras protein signal transduction; ISS:dictyBase.
464P52301    216   RAN_XENLA GTP-binding nuclear protein Ran OS=...1210.000000000000005     75.5     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
465Q9SIP0    219   RAA5D_ARATH Ras-related protein RABA5d OS=Ara...1740.000000000000005     75.5     32     48GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
466Q99P58    218   RB27B_MOUSE Ras-related protein Rab-27B OS=Mu...1820.000000000000005     75.5     27     50
GO:0005525; F:GTP binding; IDA:UniProtKB.::GO:0003924; F:GTPase activity; IDA:UniProtKB.
GO:0015031; P:protein transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
467Q6GL85    216   RAN_XENTR GTP-binding nuclear protein Ran OS=...1210.000000000000005     75.5     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
468P22124    206   RAL_DISOM Ras-related protein O-RAL OS=Discop...1620.000000000000006     75.1     30     54GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
469O24461    207   RAB7_PRUAR Ras-related protein Rab7 OS=Prunus...1890.000000000000006     75.1     29     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
470Q6FR65    214   GSP1_CANGA GTP-binding nuclear protein GSP1/R...1200.000000000000006     75.5     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
471Q9C820    206   RAG3D_ARATH Ras-related protein RABG3d OS=Ara...1650.000000000000006     75.1     30     48GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
472P42558    216   RAN_CHICK GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
473Q40522    222   RB11D_TOBAC Ras-related protein Rab11D OS=Nic...1720.000000000000006     75.5     28     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
474P62828    216   RAN_RAT GTP-binding nuclear protein Ran OS=Ra...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
475Q5R556    216   RAN_PONAB GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
476P62827    216   RAN_MOUSE GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.
GO:0030036; P:actin cytoskeleton organization; IMP:MGI.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034629; P:cellular protein complex localization; IMP:MGI.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006606; P:protein import into nucleus; IDA:MGI.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
477Q4R4M9    216   RAN_MACFA GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
478P62826    216   RAN_HUMAN GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0005829; C:cytosol; TAS:Reactome.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0050681; F:androgen receptor binding; NAS:UniProtKB.::GO:0003682; F:chromatin binding; TAS:UniProtKB.::GO:0005525; F:GTP binding; IDA:UniProtKB.::GO:0003924; F:GTPase activity; TAS:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:UniProtKB.
GO:0030521; P:androgen receptor signaling pathway; NAS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006259; P:DNA metabolic process; TAS:UniProtKB.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0007067; P:mitosis; TAS:UniProtKB.::GO:0007052; P:mitotic spindle organization; TAS:UniProtKB.::GO:0032092; P:positive regulation of protein binding; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006611; P:protein export from nucleus; NAS:UniProtKB.::GO:0006405; P:RNA export from nucleus; NAS:UniProtKB.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.::GO:0046796; P:viral genome transport in host cell; TAS:Reactome.::GO:0019058; P:viral infectious cycle; TAS:Reactome.
479P62825    216   RAN_CANFA GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
480Q3T054    216   RAN_BOVIN GTP-binding nuclear protein Ran OS=...1210.000000000000006     75.5     33     52GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
481P38555    223   YPT31_YEAST GTP-binding protein YPT31/YPT8 OS...1720.000000000000006     75.5     30     47GO:0005768; C:endosome; IDA:SGD.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0034498; P:early endosome to Golgi transport; IGI:SGD.::GO:0006887; P:exocytosis; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
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