Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...611.3     35.8     26     51GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
782Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...2490.02     41.6     20     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
783Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...3040.0003     47.4     24     41GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
784Q5AZX0    567   PFS2_EMENI Polyadenylation factor subunit 2 O...1420.007     43.1     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
785Q38884    328   EIF3I_ARATH Eukaryotic translation initiation...702.2     34.7     33     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
786Q4P2B6    1416   SEC31_USTMA Protein transport protein SEC31 O...2260.0003     47.8     24     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
787Q9I8G9    424   RBBP7_CHICK Histone-binding protein RBBP7 OS=...1440.034     40.8     26     42GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:AgBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
788Q6CEW7    511   YTM1_YARLI Ribosome biogenesis protein YTM1 O...2003.8     34.3     23     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
789Q4PA27    489   JIP5_USTMA WD repeat-containing protein JIP5 ...830.63     36.6     35     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
790Q12770    1279   SCAP_HUMAN Sterol regulatory element-binding ...1950.0007     46.6     24     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; NAS:UniProtKB.
GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0045541; P:negative regulation of cholesterol biosynthetic process; NAS:UniProtKB.::GO:0045716; P:positive regulation of low-density lipoprotein particle receptor biosynthetic process; NAS:UniProtKB.::GO:0006994; P:positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway; IMP:UniProtKB.
791Q8AVH1    425   RBBP7_XENLA Histone-binding protein RBBP7 OS=...1460.047     40.4     25     40GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
792Q6P315    425   RBBP7_XENTR Histone-binding protein RBBP7 OS=...1440.053     40     25     42GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
793P27612    794   PLAP_MOUSE Phospholipase A-2-activating prote...1471.8     35.4     22     46
GO:0016005; F:phospholipase A2 activator activity; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0006954; P:inflammatory response; IDA:MGI.
794Q640J6    313   WD82A_XENLA WD repeat-containing protein 82-A...3061.7     35     23     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
795Q6CSI1    408   HAT2_KLULA Histone acetyltransferase type B s...1022     35     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
796Q9SYX2    1029   SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 O...1380.32     37.7     25     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009658; P:chloroplast organization; IMP:TAIR.::GO:0010100; P:negative regulation of photomorphogenesis; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IGI:TAIR.::GO:2000028; P:regulation of photoperiodism, flowering; IMP:TAIR.::GO:0010218; P:response to far red light; IEP:TAIR.::GO:0010114; P:response to red light; IEP:TAIR.::GO:0048575; P:short-day photoperiodism, flowering; IMP:TAIR.
797Q92636    917   FAN_HUMAN Protein FAN OS=Homo sapiens (Human)...1090.14     39.3     23     50GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005625; C:soluble fraction; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0006672; P:ceramide metabolic process; TAS:ProtInc.
798Q6CL75    1231   SEC31_KLULA Protein transport protein SEC31 O...2440.0004     47.8     23     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
799A6QM06    1278   SCAP_BOVIN Sterol regulatory element-binding ...1950.038     40.8     22     35GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
800Q566T0    443   EED_DANRE Polycomb protein eed OS=Danio rerio...1363.7     34.3     24     43GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
801Q86A97    400   TSSC1_DICDI Protein tssc1 homolog OS=Dictyost...2230.0004     47     22     39GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
802O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...770.039     40.8     30     49GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
803Q5E9A4    368   RAE1L_BOVIN mRNA export factor OS=Bos taurus ...790.84     36.2     24     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
804Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...3280.084     39.7     22     38GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
805B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...3210.0004     47     22     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
806Q6S003    1873   KIF8_DICDI Kinesin-related protein 8 OS=Dicty...632.9     35     32     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
807Q6QEF8    472   CORO6_HUMAN Coronin-6 OS=Homo sapiens (Human)...2060.0005     47     27     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
808P0CS40    374   JIP5_CRYNJ WD repeat-containing protein JIP5 ...1700.0005     46.6     28     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
809P0CS41    374   JIP5_CRYNB WD repeat-containing protein JIP5 ...1700.0005     46.6     28     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
810P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...3300.14     39.3     19     33GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
811Q58DT8    382   WDR55_BOVIN WD repeat-containing protein 55 O...1100.003     43.9     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
records
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