Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...2630.0001     48.5     23     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
752Q66H99    688   NOL10_RAT Nucleolar protein 10 OS=Rattus norv...2890.0002     48.5     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
753Q13347    325   EIF3I_HUMAN Eukaryotic translation initiation...2600.0005     46.2     22     40GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
754Q149M9    1564   NWD1_HUMAN NACHT and WD repeat domain-contain...1520.21     38.5     22     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
755Q5IH81    333   EIF3I_RABIT Eukaryotic translation initiation...2450.0009     45.4     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
756Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...2600.0002     47.4     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
757A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...1280.003     43.9     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
758A7RM20    321   EIF3I_NEMVE Eukaryotic translation initiation...1547.9     33.1     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
759Q54ZP5    1172   WDR48_DICDI WD repeat-containing protein 48 h...895.8     33.9     22     43
760Q54KM3    754   CDH1_DICDI Anaphase-promoting complex subunit...1161     36.2     28     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
761Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...2150.0002     48.1     20     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
762O42858    398   SWD1_SCHPO Set1 complex component swd1 OS=Sch...740.0002     47.8     39     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
763Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...1790.052     40.4     23     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
764Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...1680.003     44.3     24     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
765Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2370.001     45.8     20     36GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
766Q5R9T6    383   WDR55_PONAB WD repeat-containing protein 55 O...1100.11     38.9     28     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
767B2VZH2    460   YTM1_PYRTR Ribosome biogenesis protein ytm1 O...2110.0002     47.8     25     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
768Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...2903.3     34.3     21     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
769Q9NZJ0    730   DTL_HUMAN Denticleless protein homolog OS=Hom...2400.0002     48.1     22     38GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IMP:UniProtKB.::GO:0006513; P:protein monoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0019985; P:translesion synthesis; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
770Q6NVS5    445   DCA13_XENTR DDB1- and CUL4-associated factor ...2400.0002     47.8     21     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
771Q7QJ33    428   WDR12_ANOGA Ribosome biogenesis protein WDR12...3170.0002     47.8     20     38GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
772Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1400.29     37.7     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
773Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...2300.013     42.4     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
774A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...1322.4     35     23     46
775P36037    715   DOA1_YEAST Protein DOA1 OS=Saccharomyces cere...681     36.2     35     49GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
776Q3KQ62    314   WDR83_XENLA WD repeat domain-containing prote...2060.086     39.3     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
777A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...3070.0005     46.2     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
778P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...1090.009     42.7     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
779Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...862.1     35.4     30     50GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
780P41838    352   RAE1_SCHPO Poly(A)+ RNA export protein OS=Sch...792.7     34.7     28     56GO:0055126; C:Nup82 complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0006606; P:protein import into nucleus; TAS:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
781Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...611.3     35.8     26     51GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
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