Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...521.2     35.8     33     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
722Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...1400.069     40     29     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
723Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1030.032     41.2     25     50GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
724Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...1420.003     44.3     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
725O60137    357   SWD2_SCHPO Set1 complex component swd2 OS=Sch...1970.0001     48.5     24     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
726Q6P3H7    424   RBBP4_DANRE Histone-binding protein RBBP4 OS=...1440.083     39.7     26     42GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
727Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2620.004     43.9     23     38
728A5DGL8    348   EIF3I_PICGU Eukaryotic translation initiation...1420.005     43.1     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
729Q91VU6    549   DCA11_MOUSE DDB1- and CUL4-associated factor ...2790.007     43.1     22     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
730C4Y5P7    1158   RTC1_CLAL4 Restriction of telomere capping pr...512.8     35     31     57GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
731C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...771.6     35.4     26     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
732Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...1700.02     41.6     23     41GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
733B0BNA7    325   EIF3I_RAT Eukaryotic translation initiation f...2600.001     45.1     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
734Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...2440.005     43.5     23     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
735Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...1560.003     43.9     29     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
736A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...1560.003     43.9     29     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
737Q4WP10    488   YTM1_ASPFU Ribosome biogenesis protein ytm1 O...2400.023     41.2     23     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
738B0Y5V6    488   YTM1_ASPFC Ribosome biogenesis protein ytm1 O...2400.023     41.2     23     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
739C5MIB1    1110   RTC1_CANTT Restriction of telomere capping pr...2490.91     36.6     25     40GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
740Q5B8Y3    336   EIF3I_EMENI Eukaryotic translation initiation...3070.001     45.1     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
741Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...3240.011     42.7     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
742A5DL92    453   YTM1_PICGU Ribosome biogenesis protein YTM1 O...3440.0001     48.5     20     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
743Q9QZD9    325   EIF3I_MOUSE Eukaryotic translation initiation...2600.0005     46.2     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
744P38968    1273   SEC31_YEAST Protein transport protein SEC31 O...1606.1     33.9     22     39GO:0030127; C:COPII vesicle coat; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0043332; C:mating projection tip; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0090114; P:COPII-coated vesicle budding; IDA:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
745Q1DJF7    465   YTM1_COCIM Ribosome biogenesis protein YTM1 O...2710.011     42.4     24     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
746Q5E966    325   EIF3I_BOVIN Eukaryotic translation initiation...2600.0005     46.2     22     40GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
747Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...1550.17     38.5     26     43GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
748Q54ED4    482   GRWD1_DICDI Glutamate-rich WD repeat-containi...1560.0008     46.2     22     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
749Q5ZJW8    720   DTL_CHICK Denticleless protein homolog OS=Gal...1240.01     42.7     22     45GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
750Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...590.002     45.1     37     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
751Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...2630.0001     48.5     23     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
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