Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...2470.03     40.8     21     38GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
542Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...743.3     34.7     26     50GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
543O35242    920   FAN_MOUSE Protein FAN OS=Mus musculus (Mouse)...1090.023     41.6     21     54
GO:0005123; F:death receptor binding; TAS:MGI.
544B4P116    420   WDR12_DROYA Ribosome biogenesis protein WDR12...1910.11     38.9     20     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
545P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...3120.000003     53.9     22     40
546Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...2280.00004     50.4     22     42
547Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...2540.0002     47.8     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
548Q10282    305   GBB_SCHPO Guanine nucleotide-binding protein ...1540.00001     51.6     27     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005834; C:heterotrimeric G-protein complex; TAS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010619; P:activation of adenylate cyclase activity by glucose-triggered G-protein signaling pathway; TAS:PomBase.::GO:0031138; P:negative regulation of conjugation with cellular fusion; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
549A4R3M4    461   LIS1_MAGO7 Nuclear distribution protein PAC1 ...1580.0005     46.6     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
550O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...1180.018     41.2     25     48GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
551Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...1202     35     28     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
552Q32LN7    305   WDR61_BOVIN WD repeat-containing protein 61 O...2520.73     36.2     27     42GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
553Q9GZS3    305   WDR61_HUMAN WD repeat-containing protein 61 O...2520.7     36.2     27     42GO:0016593; C:Cdc73/Paf1 complex; IDA:UniProtKB.::GO:0055087; C:Ski complex; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0080182; P:histone H3-K4 trimethylation; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IDA:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; IMP:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
554B3N534    420   WDR12_DROER Ribosome biogenesis protein WDR12...1910.1     39.3     20     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
555D1FP53    1488   LIN_MEDTR Putative E3 ubiquitin-protein ligas...1050.000004     54.3     30     49GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0009877; P:nodulation; IEA:UniProtKB-KW.
556Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...1910.31     37.7     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
557Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...1910.31     37.7     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
558Q4R4I8    906   COPB2_MACFA Coatomer subunit beta' OS=Macaca ...770.005     43.9     31     51GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
559Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...1890.01     42.4     25     42
560Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...1680.55     37     24     42
561P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...2260.096     39.3     23     38GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
562Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...1580.012     42.7     22     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
563Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...1970.0009     45.8     22     38
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
564B4Q9T6    420   WDR12_DROSI Ribosome biogenesis protein WDR12...1910.062     40     20     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
565A3LTS5    656   DSE1_PICST Protein DSE1 OS=NRRL Y-11545) (Yea...574.7     33.9     25     56
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.
566Q9P775    516   YBEG_SCHPO Uncharacterized WD repeat-containi...2360.25     38.1     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
567O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1910.67     37     24     40
568Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...1550.005     43.9     26     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
569Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...1460.0007     46.2     27     47
570Q6Q0C0    670   TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7...749.9     33.1     28     51GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0000185; P:activation of MAPKKK activity; IDA:UniProtKB.::GO:0006915; P:apoptotic process; IDA:MGI.::GO:0043410; P:positive regulation of MAPK cascade; IDA:MGI.::GO:0042981; P:regulation of apoptotic process; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
571B4MU54    423   WDR12_DROWI Ribosome biogenesis protein WDR12...491.4     35.4     27     59GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
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